| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 3,021,030 | A→T | 8.4% | Q523L (CAG→CTG) | PP_2638 → | putative Cellulose synthase operon C protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 3,021,030 | 0 | A | T | 8.4% | 201.1 / 9.7 | 62 | Q523L (CAG→CTG) | PP_2638 | putative Cellulose synthase operon C protein |
| Reads supporting (aligned to +/- strand): ref base A (31/25); new base T (2/3); total (33/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.17e-02 | |||||||||||
CACCACGGCAGCAGGCGCAGTTCGCCAGCCTGCGACGCAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCG > AE015451/3020796‑3021265 | caccacGGCAGCAGGCGCAGTTCGCCAGCCTGCGACGCAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTgca < 1:825556/235‑1 (MQ=255) gTTCGCCAGCCTGCGACGCAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCg < 1:1114967/235‑1 (MQ=255) aCGCAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCAcc < 1:1162130/206‑1 (MQ=255) cAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCTGCACCAGCCACGTGATCCgg < 2:1228995/218‑1 (MQ=255) cAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCa > 2:1176690/1‑233 (MQ=255) cAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAAc < 1:1112201/235‑1 (MQ=255) cgGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCCACGCGCt > 1:51642/1‑211 (MQ=255) cAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGCATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTg > 2:795829/1‑222 (MQ=255) gcgcGAGGACGGGCCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAg < 1:768302/207‑1 (MQ=255) cgcgAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTc > 1:471706/1‑235 (MQ=255) ggACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAAc > 1:1035737/1‑168 (MQ=255) ggACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTg > 2:474094/1‑217 (MQ=255) ggACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGCGCAGCACCAGCCACGCGGTCCGGCAACGCGCt > 1:174071/1‑173 (MQ=255) ggTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCgg < 1:631627/234‑1 (MQ=255) gACGGCCAGCCACGTGCGGGGACAGGCGTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTc < 1:181166/236‑1 (MQ=255) cagccaCGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAAcc > 2:712620/1‑153 (MQ=255) caCGTGCTGCGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGCGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACgg > 2:201096/1‑137 (MQ=255) tGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATGTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATg < 1:78287/189‑1 (MQ=255) aGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACAt < 1:526696/235‑1 (MQ=255) cTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAAcgc > 2:1118522/1‑135 (MQ=255) cTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAAcgc < 1:1118525/135‑1 (MQ=255) cTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGa < 1:1176693/236‑1 (MQ=255) cccccGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAg > 2:908928/1‑187 (MQ=255) cccGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCCGGCTGGTGCAGCACCCGCCACGTGGTCCg > 2:236246/1‑114 (MQ=255) tGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCTGCACCAGcc < 2:1142155/99‑1 (MQ=255) tGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCTGCACCAGcc > 1:1142158/1‑99 (MQ=255) tGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGt > 2:313076/1‑103 (MQ=255) tGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGtt > 1:919267/1‑235 (MQ=255) gCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCt < 2:826944/219‑1 (MQ=255) ggCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAgcggc < 2:1187607/234‑1 (MQ=255) cTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCTCGGACATGCACGCGCTGGaa > 1:378109/1‑216 (MQ=255) tGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAgg < 1:1111374/170‑1 (MQ=255) tGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAgg > 2:1111371/1‑170 (MQ=255) aTCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACa > 2:951485/1‑195 (MQ=255) cAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGa > 2:687339/1‑176 (MQ=255) cAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGa < 1:687342/176‑1 (MQ=255) aCAGTCGGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGGGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTc < 2:1124390/207‑1 (MQ=255) gTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGctct < 2:172120/136‑1 (MQ=255) gTCACCAAGGGCGCACTGGCGTGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGGGATCCGGCAACGCGCTATGc > 2:204816/1‑85 (MQ=255) gTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTgg > 1:969081/1‑216 (MQ=255) aCCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGc < 2:579936/174‑1 (MQ=255) aCCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGca < 1:575047/236‑1 (MQ=255) cAAGGGCGCACTGGCGAGGCCGAGGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAg < 1:1266847/231‑1 (MQ=255) gggCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCTGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGa < 2:1193437/179‑1 (MQ=255) gcACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAAc > 2:1010486/1‑64 (MQ=255) tGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCt > 1:330591/1‑146 (MQ=255) tGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACACGGCCGCAGTg > 1:16767/1‑236 (MQ=255) ggCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCg > 2:904040/1‑98 (MQ=255) ggCGAGGCCGACGCGGCATTTGCCAGGCTAGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGt > 2:1081084/1‑234 (MQ=255) cGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCgt > 1:28224/1‑175 (MQ=255) ggCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACAt < 2:803403/153‑1 (MQ=255) ggCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCCCAAGGCCGCAGTGCCGAg > 1:919428/1‑235 (MQ=255) gcgGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGc > 2:457402/1‑188 (MQ=255) ggCATTTGCCAGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATg > 1:953036/1‑89 (MQ=255) ggCATTTGCCAGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATg < 2:953033/89‑1 (MQ=255) ggCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACAt < 2:443287/144‑1 (MQ=255) ggCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACAt > 1:443290/1‑144 (MQ=255) ggCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCct > 1:1252405/1‑236 (MQ=255) cggatcacgtggCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCctt > 1:1273435/11‑236 (MQ=255) ttGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCcttgct < 1:474097/235‑1 (MQ=255) aggtggCTGGTGCGGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTgg < 2:488556/174‑1 (MQ=255) gTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCt < 1:731625/236‑1 (MQ=255) tGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAgcggc < 1:366154/156‑1 (MQ=255) gcagcaCCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTg > 1:992303/1‑203 (MQ=255) cagcaCCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGa > 2:331407/1‑122 (MQ=255) cagcaCCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTgg < 1:635866/235‑1 (MQ=255) agcaCCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGgcg > 1:1221829/1‑236 (MQ=255) | CACCACGGCAGCAGGCGCAGTTCGCCAGCCTGCGACGCAGCCTGGAACTTGCGCGGCTGCGCCAGCAAGGGGACGAAGCCCTGCAGCGCGAGGACTGGTCGACGGCCAGCCACGTGCTGGGCCAGGCTTCGGCCCTGGCCCCCGATGAGCCTTGGCTGGTGTATCAGCTGGCCAACAGTCTGCGTCACCAAGGGCGCACTGGCGAGGCCGACGCGGCATTTGCCAGGCTGGTGCAGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCG > AE015451/3020796‑3021265 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |