New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 44125	45 (1.030)	4 (0.110)	4/294	NT	9.7%	coding (1400/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase
	?	AE015451	= 44101	36 (0.960)					coding (1424/1998 nt)	cadA‑I	cadmium translocating P‑type ATPase

GCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTGGTACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/43875‑44125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtaccaccatggtggtacggcGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACTCCAGAAGCTTAGAGAGATGGGCATCGAACGCATGGTCATGATTTCTGGAGACCACAACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGC  <  AE015451/44101‑43873                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACG                                                                                                                                                                                                                                                              >  1:102775/1‑228          CAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTG                                                                                                                                                                                                                                              <  1:780272/235‑1                   GATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGT                                                                                                                                                                                                                                               <  2:404494/225‑1                                                       CCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTG                                                                                                                                                                                                                                              <  1:25354/190‑1                                                                 TCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTGGTACGGCGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCG                                                                                                                                                                                         <  1:298469/233‑1                                                                        cacCTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTGGTACGGCGTGCTGACAAGGATCTGGGCGCTATCGGGCTATT                                                                                                                                                                                                     <  1:262415/211‑1                                                                                                CAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTG                                                                                                                                                                                                                                              <  1:255948/149‑1                                                                                                  ACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGG                                                                                                                                                                                                                                                <  1:799355/145‑1                                                                                                                                                                                    CCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTGGTACGGCGTGCTGACAAGGATCTGGGCGCTCTCGGGCTATTGGACACACCCCGGGAGGGGG                                                                                                                                                                                 >  2:28992/1‑126                                                                                                                                                                                                CCAATAGCCCGATAGCGCCCAGATCCTTGTCACCACGCCGTACCACCATGGTGGTACGGCGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACGCCAGAAGCTTAGAGAGATGGGCATCGAACGCATG                                                                                                                                  >  1:416765/1‑161                                                                                                                                                                                                                                                   TGGTGCGGCCTGCTGCCAAGGATCTGGGGGCTATCGGGTTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACTCCAGAAGCTTAGAGATATGGGCATCGAACGCATGGTCATGATTTCTGGAGACCA                                                                                                              <  2:673445/130‑1                                                                                                                                                                                                                                                          GCGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACTCCAGAAGCTTAGAGAGATGGGCATCGAACGCATGGTCATGATTTCTGGAGACCACAACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGC  <  2:780270/231‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTAAGGCGCAGGTTTTTGATGGCCTTGACCTTGTCTTCCGGCATCAGGTCTCCCCACGCTTCATCTAAGCCAACTTGTTTGGCTACAGCCTCTGCAACGCGGTTGTGGTCTCCAGAAATCATGACCATGCGTTCGATGCCCATCTCTCTAAGCTTCTGGAGTGCCTCTTTGGCCCCCTCCCGGGGTGTGTCCAATAGCCCGATAGCGCCCAGATCCTTGTCAGCACGCCGTACCACCATGGTGGTACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/43875‑44125 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtaccaccatggtggtacggcGTGCTGACAAGGATCTGGGCGCTATCGGGCTATTGGACACACCCCGGGAGGGGGCCAAAGAGGCACTCCAGAAGCTTAGAGAGATGGGCATCGAACGCATGGTCATGATTTCTGGAGACCACAACCGCGTTGCAGAGGCTGTAGCCAAACAAGTTGGCTTAGATGAAGCGTGGGGAGACCTGATGCCGGAAGACAAGGTCAAGGCCATCAAAAACCTGCGCCTTAGCGC  <  AE015451/44101‑43873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.