New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	395456 =	42 (0.960)	3 (0.070)	3/326	NT	6.9%	coding (838/1200 nt)	fdhA	formaldehyde dehydrogenase
	?	AE015451	395503 =	41 (0.990)					coding (885/1200 nt)	fdhA	formaldehyde dehydrogenase

TGATGCGGTCCCACATGATCGCCTGCATCAGCTGGCGGTTGTATTTCATGGTCGGGGTCTGGCCGGTGTGGAAGCTGTGCGATTTCGCCCAGCCCAGGCCGAAGCGGATGCTCAGCGCGCCGATCTTGGCAGCGGCATCCACCGCGCCCGGGTCTTCGGTCACGTACAGGCCCGGGATACCGATGTTGCCGGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/395690‑395456 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggCAACATCGGTATCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCGCACAGCTTCCACACCGGCCAGACCCCGACCATGAAATACAACCGCCAGCTGATGCAGGCGATCATGTGGGACCGCATCAACATTGCTGAAGTGGTAGGTGTGCAGGTGATCAACCTGGATC  >  AE015451/395503‑395732                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATGCGGTCCCACATGATCGCCTGCATCAGCTGGCGGTTGTATTTCATGGTCGGGGTCTGGCCGGTGTGGAAGCTGTGCGATTTCGCCCAGCCCAGGCCGAAGCGGATGCTCAGCGCGCCGATCTTGGCAGCGGCATCCACCGCGCCCGGGTCTTCGGTCACGTACAGGCCCGGGATACCGATGTTGCCGGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCC                                                                                                                                                                                                                                          <  2:278588/233‑1                              AGCTGGCGGTTGTATTTCATGGTCGGGGTCTGGCCGGTGTGGAAGCTGTGCGATTTCGCCCAGCCCAGGCCGAAGCGGATGCTCAGCGCGCCGATCTTGGCAGCGGCATCCACCGCGCCCGGGTCTTCGGTCACGTACAGGCCCGGGATACCGATGTTGCCGGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCCGGCAACATCGGTA                                                                                                                                                                                                                             <  2:354504/217‑1                                                                      GGAAGCTGTGCGATTTCGCCCAGCCCAGGCCGAAGCGGATGCTCAGCGCGCCGATCTTGGCAGCGGCATCCACCGCGCCCGGGTCTTCGGTCACGTACAGGCCCGGGATACCGATGTTGCCGGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGT                                                                                                                                                                                                                                              >  2:407892/1‑160                                                                                                                                                                                               GGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCCGGCAACATCGGTATCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCG                                                                                                                           <  1:391397/154‑1                                                                                                                                                                                               GGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCCGGCAACATCGGTATCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCG                                                                                                                           >  2:391395/1‑154                                                                                                                                                                                                                                    GTGGCCGGCAACATCGGTATCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCGCACAGCTTCCACACCGGCCAGACCCCGACCATGAAATACAACCGCCAGCTGATGCAGGCGATCATGTGGGACCGCATCAACATTGC                                     <  1:787161/203‑1                                                                                                                                                                                                                                      GGCCGGCAACCTCGGTAGCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCGCACAGCTTCCACACCGGCCAGACCCCGACCATGAAATACAACCGCCAGCTGATGCAGGCGATCATGTGGGACCGCATCAACATTGCTGAAGTGGTAGGTGTGCAGGTGATCAACCTGGATC  <  1:40329/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGATGCGGTCCCACATGATCGCCTGCATCAGCTGGCGGTTGTATTTCATGGTCGGGGTCTGGCCGGTGTGGAAGCTGTGCGATTTCGCCCAGCCCAGGCCGAAGCGGATGCTCAGCGCGCCGATCTTGGCAGCGGCATCCACCGCGCCCGGGTCTTCGGTCACGTACAGGCCCGGGATACCGATGTTGCCGGCCACGCGGGTCACTTGCATCAGCGAGTTCAGCACGGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/395690‑395456 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggCAACATCGGTATCCCGGGCCTGTACGTGACCGAAGACCCGGGCGCGGTGGATGCCGCTGCCAAGATCGGCGCGCTGAGCATCCGCTTCGGCCTGGGCTGGGCGAAATCGCACAGCTTCCACACCGGCCAGACCCCGACCATGAAATACAACCGCCAGCTGATGCAGGCGATCATGTGGGACCGCATCAACATTGCTGAAGTGGTAGGTGTGCAGGTGATCAACCTGGATC  >  AE015451/395503‑395732

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.