New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	470897 =	46 (1.050)	3 (0.070)	3/328	NT	6.5%	coding (60/3744 nt)	PP_0386	Sensory box protein
	?	AE015451	470946 =	42 (1.000)					coding (11/3744 nt)	PP_0386	Sensory box protein

AGCTGCGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/471136‑470897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCGGGTGGCGCAGCTTGCGCAACGCCTTCGCTTCGATCTGACGGATCCGCTCAC  >  AE015451/470946‑471175                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCTGCGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGG                                                                                                                                                                                                                                             <  1:779814/235‑1       GCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                                                                                                                        <  1:401100/234‑1                     AGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGG                                                                                                                                                                                                                                             <  1:805763/215‑1                      gagacagCCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACA                                                                                                                                                                                                                              <  1:2290/222‑1                            ACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                                                                                                                        <  1:66756/213‑1                                                                                              CCCCTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC                                                                                                                                                                                                                                        <  2:443276/147‑1                                                                                                                                     ctATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGT                                                                                                                                                                                                <  2:321460/146‑1                                                                                                                                                                                             GAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGCTTCAGGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCG                                                                                                                                                                          <  1:323283/114‑1                                                                                                                                                                                                                      CTGATTTTGTGGAACACAACG                                                                                                                                                                                                                                              >  2:408694/1‑21                                                                                                                                                                                                                                             gGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCGGGTGGCGCAGCTTGCGCAACGCCTTCGCTTCGATCTGACGGATCCGCTCAC  <  1:732176/233‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCTGCGCCACCCGACTCGCAGCGAGCACCTGCGCTCCTTCCTCGACGAGTGATGACAAAACCCCGGCCCAGGCCGGGGTTTTTCTTTAGTGGCCCGTGACATAAAGCCCGCCTTCCGTTGCACACCTGCGGCAATGCCCGTCTACACTCGACTTCAGACCACCTGAGTGCGAGGCTGCCATGTCCTTGAAGCCGGCCATTCTGTTGCTGATCCTGATTTTGTGGAACACAACGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/471136‑470897 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccggcTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCGGGTGGCGCAGCTTGCGCAACGCCTTCGCTTCGATCTGACGGATCCGCTCAC  >  AE015451/470946‑471175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.