New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	719760 =	35 (0.800)	3 (0.070)	3/324	NT	8.3%	coding (157/1410 nt)	PP_0613	Amidase family protein
	?	AE015451	719885 =	33 (0.800)					coding (32/1410 nt)	PP_0613	Amidase family protein

AAATGCCGCGCCCCAGGACCTGGCCGATGGTTGCGACGTCCTGTTGCGCGCCATGTTCCAGGCCGCCAACCCGGGAGCCCGTTGAAATGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/720002‑719760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacggcgGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGCTCGGCGAGGAAGATCGCATCGTGACCGGCGCCGCTGACGATATCCATGTG  >  AE015451/719885‑720115                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAATGCCGCGCCCCAGGACCTGGCCGATGGTTGCGACGTCCTGTTGCGCGCCATGTTCCAGGCCGCCAACCCGGGAGCCCGTTGAAATGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGT                                                                                                                                                                                                                                                 <  1:342875/235‑1        GCGCCCCAGGACCTGGCCGATGGTTGCGACGTCCTGTTGCGCGCCATGTTCCAGGCCGCCAACCCGGGAGCCCGTTGAAATGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCG                                                                                                                                                                                                                                         <  1:681090/236‑1                         CGATGGTTGCGACGTCCTGTTGCGCGCCATGTTCCAGGCCGCCAACCCGGGAGCCCGTTGAAATGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGAC                                                                                                                                                                                                                                             >  1:795572/1‑215                                                                                        TGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCACCGGGCTCCCGGGT                                                                                                                                                                                       <  1:493912/206‑1                                                                                                                                                                                  ACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGG                                                               >  1:638696/1‑236                                                                                                                                                                                               GCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGC                                                    <  2:638694/234‑1                                                                                                                                                                                                                                           TCGACGGCGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGCTCGGCGAGGAAGATCGCATCGTGACCGGCGCCGCTGACGATATCC       <  1:686909/235‑1                                                                                                                                                                                                                                                 GCGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGCTCGGCGAGGAAGATCGCATCGTGACCGGCGCCGCTGACGATATCCATGTG  <  2:681088/234‑1                                                                                                                                                                                                                                                  CGGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGCTCGGCGAGGAAGATCGCATCGTGACCGGCGCCG                   >  1:67416/1‑216                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAATGCCGCGCCCCAGGACCTGGCCGATGGTTGCGACGTCCTGTTGCGCGCCATGTTCCAGGCCGCCAACCCGGGAGCCCGTTGAAATGACCCAGAAAACCGCGATTGGCGAACTCACCGCCGTCGAACTGCTCGAACTGTACCATCGCCGCCAGTTGTCACCCGTCGAGGTGGTCGACGATGTGCTGGCGCGTATCGACCTGCATAACCCGGCGGTCAACGCCTTCTGCCATGTCGACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/720002‑719760 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgacggcgGTGAGTTCGCCAATCGCGGTTTTCTGGGTCATTTCAACGGGCTCCCGGGTTGGCGGCCTGGAACATGGCGCGCAACAGGACGTCGCAACCATCGGCCAGGTCCTGGGGCGCGGCATTTTCGATTTCGTTGTGGCTGATGCCGCCTTCGCATGGCACGAAGATCATCCCGGCCGGGCCCAGCTCGGCGAGGAAGATCGCATCGTGACCGGCGCCGCTGACGATATCCATGTG  >  AE015451/719885‑720115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.