New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 1151322 = | 53 (1.210) | 4 (0.100) | 4/326 | NT | 7.8% | coding (47/1827 nt) | edd | phosphogluconate dehydratase |
? | AE015451 | 1151368 = | 44 (1.060) | coding (93/1827 nt) | edd | phosphogluconate dehydratase |
TGCTTGATCTGCTCGGGGAAGTGCAAGTAAGGCTGGTGGGCAGACAACATGTCGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1151553‑1151322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcCAGTGAAGGCCCCATGCGTGCCAGCCTGCAGTGCGCCAACTTCGCCCACGGCGTGGCCGGTTGCGGCAGCGAAGACAAGCAGACTCTGCGCCTGATGAACGCGGCCAACGTGGCCATCGTCTCGGCCTACAACGACATGTTGTCTGCCCACCAGCCTTACTTGCACTTCCCCGAGCAGATCAAGCAGGCCCT > AE015451/1151368‑1151559 TGCTTGATCTGCTCGGGGAAGTGCAAGTAAGGCTGGTGGGCAGACAACATGTCGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCAGT < 1:2878/236‑1 AAGTCAGGCTGGTGGGCAGACAACATGTCGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCAGTGAAGGCCCCATGCGTGCCAGCCT < 1:348835/235‑1 AAGTAAGGCTGGTGGGCAGACAACATGTCGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGG > 2:472730/1‑202 GTCGTTGTAGCCCGGGACGATGGCCACGTGGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCG < 2:421453/178‑1 CGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCA < 2:751800/182‑1 TGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCAGTGAAGGCCCCATGCGTGCCAGCCTGCAGTGCGCCAACTTCGCCCAC < 2:795318/172‑1 cCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCAGTGAAGGCCCCATGCGTGCCAGCCTGCAGTG < 2:613269/153‑1 CTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGCCAGTGAAGGCCCCATGCGTGCCAGCCTGCAGTGCGCCAA < 2:531616/88‑1 GCCAGTGAAGGCCCCATGCGGGCCAGCCTGCAGTGCGCCAACTTCGCCCACGGCGTGGCCGGTTGCGGCAGCGAAGACAAGCAGACTCTGCGCCTGATGAACGCGGCCAACGTGGCCATCGTCTCGGCCTACAACGACATGTTGTCTGCCCACCAGCCTTACTTGCACTTCCCCGAGCAGATCAAGCAGGCCCT < 2:203593/194‑1 TGCTTGATCTGCTCGGGGAAGTGCAAGTAAGGCTGGTGGGCAGACAACATGTCGTTGTAGGCCGAGACGATGGCCACGTTGGCCGCGTTCATCAGGCGCAGAGTCTGCTTGTCTTCGCTGCCGCAACCGGCCACGCCGTGGGCGAAGTTGGCGCACTGCAGGCTGGCACGCATGGGGCCTTCACTGGCCGCGCCGCGAATCAGTTGCAGGTAGCGTTCGCGGGTGGCGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1151553‑1151322 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcggcCAGTGAAGGCCCCATGCGTGCCAGCCTGCAGTGCGCCAACTTCGCCCACGGCGTGGCCGGTTGCGGCAGCGAAGACAAGCAGACTCTGCGCCTGATGAACGCGGCCAACGTGGCCATCGTCTCGGCCTACAACGACATGTTGTCTGCCCACCAGCCTTACTTGCACTTCCCCGAGCAGATCAAGCAGGCCCT > AE015451/1151368‑1151559 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |