New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 159424850 (1.140)6 (0.140) 6/326 NT 11.1% coding (1175/1320 nt) kgtP Alpha‑ketoglutarate permease
?AE015451 = 1594250 48 (1.150)coding (1173/1320 nt) kgtP Alpha‑ketoglutarate permease

GAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1594044‑1594248
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGGGCGCCCCATTGCATGGAGCGCCCCTTTTCTATTCAGACTTTTCCTTCTTAACGCCCTATT  <  AE015451/1594250‑1594018
                                                                                                                                                                                                                                                                                                                                                                                                                                                      
GAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCG                                                                                                                                                                                                                                            <  2:798093/204‑1
                                                                                                             AAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGAT                                                                                                                                                                                                 >  2:428010/1‑138
                                                                                                                            AGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGG                                                                                                                                                                                        >  1:656123/1‑132
                                                                                                                              GCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACG                                                                                                                                                                          >  1:733359/1‑144
                                                                                                                                                    AGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCG                                                                                                         >  1:301978/1‑187
                                                                                                                                                                   CCATCCCGGCGCTCTTGAACCACAGGGCCACGTAGTCGGCGCCACCGCCGAATACGTGGCCCTGTGGGTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTC                                                                                                          >  2:614217/1‑171
                                                                                                                                                                                          AGGGCCACGTATGCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGGGC                                                            <  1:428012/194‑1
                                                                                                                                                                                                    ATTCGGCGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGGGCGCCCCAT                                                     >  1:780271/1‑191
                                                                                                                                                                                                          CGGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGGGCGCCCCATTGCATGGAGCGCCCCTTTTCTATTCAGACTTTTCCTTCTTAACGCCCTATc  >  2:553965/1‑235
                                                                                                                                                                                                           GGCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGG                                                              <  2:347137/175‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                      
GAATAGAAAAGGGGCGCTCCATGCAATGGGGCGCCCCTTTTAGTACTGCCAGGCCAGCGTTACTCAGTGGTAATCCGCGAGTGCTGCTTGGTGTCTTTCATGGTCGCGTAAACCAGCAGCGAGCAGGCGATACAGGCGGTGACGTACCAGTAGAAGCCGCTCTCCATCCCGGCGCTCTTGAACCACAGGGCCACGTATTCGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1594044‑1594248
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcggcggCACCGCCGAATACGTGGCCCTGTGGTTCAAGAGCGCCGGGATGGAGAGCGGCTTCTACTGGTACGTCACCGCCTGTATCGCCTGCTCGCTGCTGGTTTACGCGACCATGAAAGACACCAAGCAGCACTCGCGGATTACCACTGAGTAACGCTGGCCTGGCAGTACTAAAAGGGGCGCCCCATTGCATGGAGCGCCCCTTTTCTATTCAGACTTTTCCTTCTTAACGCCCTATT  <  AE015451/1594250‑1594018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.