| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 1776718 = | 42 (0.960) | 3 (0.070) | 3/326 | NT | 6.5% | coding (321/501 nt) | PP_1584 | conserved protein of unknown function |
| ? | AE015451 | 1776768 = | 46 (1.110) | coding (371/501 nt) | PP_1584 | conserved protein of unknown function | |||||
AAAAACAGTATCCTACTCATAACAACCGGCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1776943‑1776718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAGTACGATGCGCTTCTGCCATCCGGCTGAGTTGGATTGCTCGGCGCCGGTTGTTATGAGTAGGA > AE015451/1776768‑1776933 AAAAACAGTATCCTACTCATAACAACCGGCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCG < 1:275697/221‑1AAAAACAGTATCCTACTCATAACAACCGGCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCG > 2:275695/1‑221 AACAACCGGCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGTCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCGCCATG < 1:157368/211‑1 GCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGC > 1:139445/1‑194 GCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGGGAGCACCACGGCGTCGCGGTTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCGCCATGGTGCTCTCCGAC < 2:431794/187‑1 GATTGGTCATAAGCCTTCGCCAGCTCTCGCTTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGGATCC > 2:112128/1‑117 GTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGGGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCA < 1:75753/160‑1 TGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGA < 2:325738/123‑1 CGCGCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAGTACGATGCGCTTCTGCCATCCGGCTGAGTTGGATTGCTCGGCGCCGGTTGTTAT < 2:665329/165‑1 GCCGCCATGGTGCTCTCCGACCTGCTCACACGGTCTGGCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAGTACGATGCGCTTCTGCCATCCGGCTGAGTTGGATTGCTCGGCGCCGGTTGTTATGAGTAGGA < 1:164747/170‑1 AAAAACAGTATCCTACTCATAACAACCGGCGCCGAGCAATCCAACTCAGCCGGATGGCAGAAGCGCATCGTACTCTCGCCGGCACTGCTCCCCTGCTATTCGGGATTGGTCATAAGCCTTCGCCAGCTCTCGATTCGTTTCGACAGACCGTGTGAGCAGGTCGGAGAGCACCATGGCGGCGCGGGTGGCTGCCTGGCCTCGGGCGACAGCGGCGGTATCCGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/1776943‑1776718‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcgccgCCATGGTGCTCTCCGACCTGCTCACACGGTCTGTCGAAACGAATCGAGAGCTGGCGAAGGCTTATGACCAATCCCGAATAGCAGGGGAGCAGTGCCGGCGAGAGTACGATGCGCTTCTGCCATCCGGCTGAGTTGGATTGCTCGGCGCCGGTTGTTATGAGTAGGA > AE015451/1776768‑1776933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |