New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 1933967 | 35 (0.800) | 3 (0.070) | 3/324 | NT | 8.3% | coding (724/828 nt) | minC | Probable septum site‑determining protein MinC |
? | AE015451 | = 1934030 | 33 (0.800) | coding (661/828 nt) | minC | Probable septum site‑determining protein MinC |
GAAGTAACCACGAGAATCTTGGCCAAGGTGTTTCACCCCTAAAAATAGTCGGGACACTTGTCCCTGCAAAAAACTGAAATAGCTAAATAAAGGCAACGGTAAAAAAGTTGCTCTAAAAATGCTGGCAAGTATCCGTTAAAGACGGGTGATGTTCAACACGTCACCAGACAGGCTGACTTGCACGCTGGTCCCCCACAGCGGATCCCGGCGCAGGTCTTCGCAGACTTTGTACTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1933728‑1933967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccggcATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACCGCCGAAATGGTCTCGATCGCCGGCCAGTACAAAGTCTGCGAAGACCTGCGCCGGGATCCGCTGTGGGGGACCAGCGTGCAAGTCAGCCTGTCTGGTGACGTGTTGAACATCACCCGTCTTTAACGGATACTTGCCAGCATTTTTAGAGCAACTTTTTTACCGTTGCCTTTATTTAGCTATTTCAGT < AE015451/1934030‑1933800 GAAGTAACCACGAGAATCTTGGCCAAGGTGTTTCACCCCTAAAAATAGTCGGGACACTTGTCCCTGCAAAAAACTGAAATAGCTAAATAAAGGCAACGGTAAAAAAGTTGCTCTAAAAATGCTGGCAAGTATCCGTTAAAGACGGGTGATGTTCAACACGTCACCAGACAGGCTGACTTGCACGCTGGTCCCCCACAGCGGATCCCGGCGCAGGTCTTCGCAGACTTTGTACTGGC < 1:110021/236‑1 ATGTTCAACACGTCACCAGACAGGCTGACTTGCACGCTGGTCCCCCACAGCGGATCCCTGCGCAGGTCTTCGCAGACTTTGTACTGGCCGGCATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACTGCCGAAATGG > 1:427455/1‑147 GACTTGCACGCTGGTCCCCCACAGCGGATCCCGGCGCAGGTCTTCGCAGACTTTGTACTGGCCGGCATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACCGCCGAAATGGTCTCGATCGCCGGCCAGTACAAAGTCTGCGAAGACCTGCGCCGGGATCCGCTGTGGGG > 1:680656/1‑179 TTCGCAGACTTTGTACTGGCCGGCATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACCGCCGAAATGGTCTCGATCGCCGGCCAGTACAAAGTCTGCGAAGACCTGCGCCGGGATCCGCTGTGGGGGACCAGCGTGCAAGTCAGCCTGTCTGGTGACGTGTTGAACATCACCCGTCTTTAACGGATACTTGCCAGCATTTTTAGAGCAACTTTTTTACCGT > 2:284317/1‑232 GGCATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACCGCCGAAATGGTCTCGATCGCCGGCCAGTACAAAGTCTGCGAAGACCTGCGCCGGGATCCGCTGTGGGGGACCAGCGTGCAAGTCAGCCTGTCTGGTGACGTGTTGAACATCACCCGTCTTTAACGGATACTTGCCAGCATTTTTAGAGCAACTTTTTTACCGTTGCCTTTATTTAGCTATTTCAGT > 2:380456/1‑234 GAAGTAACCACGAGAATCTTGGCCAAGGTGTTTCACCCCTAAAAATAGTCGGGACACTTGTCCCTGCAAAAAACTGAAATAGCTAAATAAAGGCAACGGTAAAAAAGTTGCTCTAAAAATGCTGGCAAGTATCCGTTAAAGACGGGTGATGTTCAACACGTCACCAGACAGGCTGACTTGCACGCTGGTCCCCCACAGCGGATCCCGGCGCAGGTCTTCGCAGACTTTGTACTGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/1933728‑1933967 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccggcATCAAAGGCAACACCAAGGCGCGTATCTTCTGCCAGCAGATGACCGCCGAAATGGTCTCGATCGCCGGCCAGTACAAAGTCTGCGAAGACCTGCGCCGGGATCCGCTGTGGGGGACCAGCGTGCAAGTCAGCCTGTCTGGTGACGTGTTGAACATCACCCGTCTTTAACGGATACTTGCCAGCATTTTTAGAGCAACTTTTTTACCGTTGCCTTTATTTAGCTATTTCAGT < AE015451/1934030‑1933800 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |