| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2051064 | 41 (0.940) | 3 (0.070) | 3/324 | NT | 7.2% | intergenic (‑62/+24) | PP_1825/PP_1826 | conserved exported protein of unknown function/Hydrolase, isochorismatase family |
| ? | AE015451 | = 2051065 | 39 (0.940) | intergenic (‑63/+23) | PP_1825/PP_1826 | conserved exported protein of unknown function/Hydrolase, isochorismatase family | |||||
CCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2050866‑2051064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcccggcAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAACT < AE015451/2051065‑2050833 gcctggcgGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCC < 1:531277/184‑1gcctggcgGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCC > 2:531275/9‑192 GGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTG > 2:366273/1‑182 ATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGGCGCCA > 2:729373/1‑136 TCCGGAATTCGACCTGCTGCTGCCCATCGGGCTCCGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGCTATCCCCCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCA > 2:153074/1‑133 CGCCCGGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGC < 2:512770/114‑1 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAACT > 1:552208/1‑236 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGACGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAACT > 1:423439/1‑236 GGCAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGC > 1:688687/1‑160 CCGGCGACGCCGGCCATGGCCAGCAATACGCCCAGCGTCGCCAGCAGGGCCGACAGGCCGGCCGCCAGGCGGGCGCCCCAGTTACGCGGTTCGCGCGGGCGCAGGCGCTTGGCGTCGAAACTGCCTTTAAGCTTCATTCCGCTCTCCTCGGTGGATATCCGGAATTCGACCTGCTGCTGCCCATCGGGTTCCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2050866‑2051064‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcccggcAGCCGGGCGGAACCCGATGGGCAGCAGCAGGTCGAATTCCGGATATCCACCGAGGAGAGCGGAATGAAGCTTAAAGGCAGTTTCGACGCCAAGCGCCTGCGCCCGCGCGAACCGCGTAACTGGGGCGCCCGCCTGGCGGCCGGCCTGTCGGCCCTGCTGGCGACGCTGGGCGTATTGCTGGCCATGGCCGGCGTCGCCGGGCTGCTAGGCAACTACCCTGCCCTGCAGGAACT < AE015451/2051065‑2050833 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |