New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2101764	57 (1.310)	5 (0.130)	5/306	NT	8.8%	coding (544/768 nt)	PP_1878	conserved protein of unknown function
	?	AE015451	= 2101746	53 (1.360)					coding (562/768 nt)	PP_1878	conserved protein of unknown function

GCGAAGAGGCCGGCACAGGTTAACCAATCAGTCGTAGATCACCTTCTTCTTCCAGGTTTCTTCCTCATCGGTCTTGAGCCCATCGGTCAATTCGTTGTGCTCGTCTTCTGCCGGGGCCATGCGGTCCAGTACCTGGGCATTGGCCCGGGCCAACAGTTTCTCAAGATACGTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2101513‑2101764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcgcgcctggccTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATGCCCAGGTACTGGACCGCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCG  <  AE015451/2101746‑2101581                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGAAGAGGCCGGCACAGGTTAACCAATCAGTCGTAGATCACCTTCTTCTTCCAGGTTTCTTCCTCATCGGTCTTGAGCCCATCGGTCAATTCGTTGTGCTCGTCTTCTGCCGGGGCCATGCGGTCCAGTACCTGGGCATTGGCCCGGGCCAACAGTTTCTCAAGATACGTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAG                                                                                                                                                                                         >  1:759317/1‑235                         CAATCAGTCGTAGATCACCTTCTTCTTCCAGGTTTCTTCCTCATCGGTCTTGAGCCCATCGGTCAATTCGTTGTGCTCGTCTTCTGCCGGGGCCATGCGGTCCAGTACCTGGGCATTGGCCCGGGCCAACAGTTTCTCAAGATACGTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCCTTCGAGCG                                                                                                                                                                <  1:137707/236‑1                                                                                                                                                                          GTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCC                                                                                                                                                                             <  1:322995/78‑1                                                                                                                                                                          GTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCC                                                                                                                                                                             >  2:322993/1‑78                                                                                                                                                                                                  GGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCCTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATGCCCAGGTACTGGACCGCATGGCCCCGGCCGAAGACGAGCACAACGAATTGACCGA                >  1:609474/1‑211                                                                                                                                                                                                    CTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCCTTCGAGCGCGGCGTGCAG                                                                                                                                                      >  1:152502/1‑75                                                                                                                                                                                                                GCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCCTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATGCCCAGGTACTGGACCGCATGGCCCCGGCAGAA                                       >  1:484808/1‑174                                                                                                                                                                                                                         CTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCCTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAG                                                                                                                                 >  2:152500/1‑75                                                                                                                                                                                                                                            GCCAGGCGCGCCTGGCCTTCGAGCGGGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATG                                                                       <  1:760759/114‑1                                                                                                                                                                                                                                                          ggCTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATGCCCAGGTACTGGACCGCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCG  <  2:172548/167‑1                                                                                                                                                                                                                                                                                                                                                                                                                                    GCGAAGAGGCCGGCACAGGTTAACCAATCAGTCGTAGATCACCTTCTTCTTCCAGGTTTCTTCCTCATCGGTCTTGAGCCCATCGGTCAATTCGTTGTGCTCGTCTTCTGCCGGGGCCATGCGGTCCAGTACCTGGGCATTGGCCCGGGCCAACAGTTTCTCAAGATACGTCAGCTGCTCTTCATACACCTTCGGCTCCGGCTGCTTGCGCAAATACTGCACGCCGCGCTCGAAGGCCAGGCGCGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2101513‑2101764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaggcgcgcctggccTTCGAGCGCGGCGTGCAGTATTTGCGCAAGCAGCCGGAGCCGAAGGTGTATGAAGAGCAGCTGACGTATCTTGAGAAACTGTTGGCCCGGGCCAATGCCCAGGTACTGGACCGCATGGCCCCGGCAGAAGACGAGCACAACGAATTGACCGATGGGCTCAAGACCG  <  AE015451/2101746‑2101581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.