New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3614175	36 (0.820)	5 (0.120)	5/328	NT	12.4%	coding (48/648 nt)	pet	Pet18 protein
	?	AE015451	= 3614176	36 (0.860)					coding (49/648 nt)	pet	Pet18 protein

GCCACCAAGGGGAGCCCGGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3613938‑3614175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATGATCCGGATCAGGTTCGAAGGGTCACCGCGCTGTAGCGTTCAGCGGTTTCTCAGCCCATTGCCGGGCTCCCCTTG  <  AE015451/3614176‑3613943                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCACCAAGGGGAGCCCGGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGCGCGAGCCGA                                                                                                                                                                                                                                              >  1:127790/1‑236                  GGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGAC                                                                                                                                                                                                                                             >  2:369525/1‑220                  GGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAG                                                                                                                                                                                                                                                  >  2:516362/1‑215                                                                                                                                               CATGTCAATTGCCAAGGGCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCGGCGCCGCCAGAGCGCGCCGACCAGGTCGGCTCCGTCTGGCGGCG                                                                                                                                                                                                                      >  2:675716/1‑118                                                                                                                                                                                   AAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCAg                                                                             >  1:79267/1‑218                                                                                                                                                                                             ACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGCGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATTATCCG                                                                       >  1:112943/1‑215                                                                                                                                                                                                           TTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCG                                                                                 <  1:97401/191‑1                                                                                                                                                                                                           TTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCG                                                                                 >  2:97400/1‑191                                                                                                                                                                                                                                          CGACCGGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATGATCCGGATCAGGTTCGAAGGG                                                       <  2:333240/186‑1                                                                                                                                                                                                                                            ACCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATGATCCGGATCAGGTTCGAAGGGTCACCGCGCTGTAGCGTTCAGCGGTTTCTCAGCCCATTGCCGGGCTCCCCT    >  1:759160/1‑235                                                                                                                                                                                                                                             CCAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATGATCCGGATCAGGTTCGAAGGGTCACCGCGCTGTAGCGTTCAGCGGTTTCTCAGCCCATTGCCGGGCTCCCCTTG  <  1:202366/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCCACCAAGGGGAGCCCGGCAATGGGCTGAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3613938‑3614175 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaccAGGTCGGCTCGCTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCTTGATGAGGGTGACAGCGAGACCTTGGCAATTGACATGGACTGGCCTCGCAGTGAGGCCGGCAAAAAGGCAGGTTACAAGCCCCATCCCTTCGCCGGCATGATCCGGATCAGGTTCGAAGGGTCACCGCGCTGTAGCGTTCAGCGGTTTCTCAGCCCATTGCCGGGCTCCCCTTG  <  AE015451/3614176‑3613943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.