| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5240925 = | 39 (0.890) | 3 (0.070) | 3/324 | NT | 7.7% | coding (487/807 nt) | PP_4618 | conserved protein of unknown function |
| ? | AE015451 | 5240960 = | 35 (0.850) | coding (522/807 nt) | PP_4618 | conserved protein of unknown function | |||||
AGAGAGAGGCGCGAGTCATGTAGTCGCTCACCTGCACCGGGCCCAACTGCATGATCCGCTCTGAATCGATCAATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5241108‑5240925‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccagCCCGCTGCAGATGCTGCAACGCCTGTCACGCAACCTGCGCCAACTGCACATCAGTAACGACAACCACCTGGCGGCATTGATCGATTCAGAGCGGATCATGCAGTTGGGCCCGGTGCAGGTGAGCGACTACATGACTCGCGCCTCTCTCTACCATCATCTGGATTGCCCGCAGGCCGAGCGCTTCGACCTGGAGCATGCATTGCT > AE015451/5240960‑5241163 AGAGAGAGGCGCGAGTCATGTAGTCGCTCACCTGCACCGGGCCCAACTGCATGATCCGCTCTGAATCGATCAATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAG > 1:306197/1‑178AGAGAGAGGCGCGAGTCATGTAGTCGCTCACCTGCACCGGGCCCAACTGCATGATCCGCTCTGAATCGATCAATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAG < 2:306195/178‑1 GAGTCATGTAGTCGCTCACCTGCACCGGGCCCAACTGCATGATCCGCTCTGAATCGATCAATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAG > 1:363583/1‑172 AATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGGTGCGCAGGTGCTCGGCTGTCAGCGCCAGCCCGCTGCAGATGCTGCAACGCCTGTCACGCAACCTGCGCCAACTGCACATCt > 2:442398/1‑165 CGCCAGGTGGTTGTGGTTACTGATGTGTAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCTTCTGCAGCGGGCTGGCGGTGGGCAGGTGCTCGGCTGTCAGCGCCAGGGCGCTGCAGATGCTGCAACGCCTGTCACGCTACCTGCGC < 1:442400/148‑1 CTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAGCCCGCTGCAGATGCTGCAACGCCTGTCACGCAACCTGCGCCAACTGCACATCAGTAACGACAACCACCTGGCGGCATTGATCGATTCAGAGCG > 2:668196/1‑128 GCCAGCCCGCTGCAGATGCTGCAACGCCTGTCACGCAACCTGCGCCAACTGCACATCAGTAACGACAACCACCTGGCGGCATTGATCGATTCAGAGCGGATCATGCAGTTGGGCCCGGTGCAGGTGAGCGACTACATGACTCGCGCCTCTCTCTACCATCATCTGGATTGCCCGCAGGCCGAGCGCTTCGACCTGGAGCATGCATTGCT < 1:310306/209‑1 AGAGAGAGGCGCGAGTCATGTAGTCGCTCACCTGCACCGGGCCCAACTGCATGATCCGCTCTGAATCGATCAATGCCGCCAGGTGGTTGTCGTTACTGATGTGCAGTTGGCGCAGGTTGCGTGACAGGCGTTGCAGCATCTGCAGCGGGCTGGCGCTGCGCAGGTGCTCGGCTGTCAGCGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5241108‑5240925‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgccagCCCGCTGCAGATGCTGCAACGCCTGTCACGCAACCTGCGCCAACTGCACATCAGTAACGACAACCACCTGGCGGCATTGATCGATTCAGAGCGGATCATGCAGTTGGGCCCGGTGCAGGTGAGCGACTACATGACTCGCGCCTCTCTCTACCATCATCTGGATTGCCCGCAGGCCGAGCGCTTCGACCTGGAGCATGCATTGCT > AE015451/5240960‑5241163 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |