| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5331205 | 55 (1.260) | 4 (0.100) | 4/320 | NT | 6.7% | coding (356/1173 nt) | PP_4692 | putative aspartate/tyrosine/aromatic aminotransferase |
| ? | AE015451 | = 5331229 | 60 (1.470) | coding (332/1173 nt) | PP_4692 | putative aspartate/tyrosine/aromatic aminotransferase | |||||
GGCCATGCCGCTCGTGGGTGGTTCTGGCCAGGCAGGCCAACGCCTCGCGCCCCAGCACGGTACCGGTCGGGTTGGCCGGCGAAGCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5330963‑5331205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcagccTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTACCCGTGCAATCGCCACTTCCTGCGCCTGGTCGAGGGCGGGGCCCAATTGGTACCGGTGGGCCCGGATGTGAACTATCAGCTGACTGCCGACCTGGTTGAGCGCTACTGGGACAAGGACACCGTCGGTGCCCTGGTCGCTTCGCCGGCCAACCCGACCGGTACCGTGC < AE015451/5331229‑5331017 GGCCATGCCGCTCGTGGGTGGTTCTGGCCAGGCAGGCCAACGCCTCGCGCCCCAGCACGGTACCGGTCGGGTTGGCCGGCGAAGCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGC > 1:572327/1‑235GGCCATGCCGCTCGTGGGTGGTTCTGGCCAGGCAGGCCAACGCCTCGCGCCCCAGCACGGTACCGGTCGGGTTGGCCGGCGAAGCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGC < 1:717288/235‑1 CCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTACCCGTGCAATGGCCACTTCCTGCGCCTGGTCGAGGGg > 1:175052/1‑139 CTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTACCCGTGCAATCGCCACTTCCTGCGCCTGGTCGAGGGCGGGGCCCAATTGGTACCGGTGGGCCCGGct > 2:421403/1‑167 ACCCGGATCGGCCAGCAGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTGTCCGTGCAATCGCCACTTCCTGCGCCTGGTCGAGGGCGGGGCCCAATTGGTACCGGTGGGCCCGGATGTGAACTATCAGCTGACTGCCGACCTGGTTGAGCGCTACTGGGACAAGGACACCGTCGGTGCCCTGGTCGCTTCGCCGGCCAACCCGACCGGTACCGTtc > 2:417571/1‑231 CGGATCGGCCAGCGGCCTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTACCCGTGCAATCGCCACTTCCTGCGCCTGGTCGAGGGCGGGGCCCAATTGGTACCGGTGGGCCCGGATGTGAACTATCAGCTGACTGCCGACCTGGTTGAGCGCTACTGGGACAAGGACACCGTCGGTGCCCTGGTCGCTTCGCCGG > 2:438051/1‑209 GGCCATGCCGCTCGTGGGTGGTTCTGGCCAGGCAGGCCAACGCCTCGCGCCCCAGCACGGTACCGGTCGGGTTGGCCGGCGAAGCGACCAGGGCACCGACGGTGTCCTTGTCCCAGTAGCGCTCAACCAGGTCGGCAGTCAGCTGATAGTTCACATCCGGGCCCACCGGTACCAATTGGGCCCCGCCCTCGACCAGGCGCAGGAAGTGGCGATTGCACGGGTAACCCGGATCGGCCAGCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5330963‑5331205‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcagccTGCTGGTGGACCCGGGCAAGCACTGGCTGCTGGCCGATCCGGGTTACCCGTGCAATCGCCACTTCCTGCGCCTGGTCGAGGGCGGGGCCCAATTGGTACCGGTGGGCCCGGATGTGAACTATCAGCTGACTGCCGACCTGGTTGAGCGCTACTGGGACAAGGACACCGTCGGTGCCCTGGTCGCTTCGCCGGCCAACCCGACCGGTACCGTGC < AE015451/5331229‑5331017 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |