New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5437107	38 (0.870)	3 (0.070)	3/318	NT	8.1%	coding (452/837 nt)	PP_4775	conserved protein of unknown function
	?	AE015451	= 5437095	33 (0.810)					coding (464/837 nt)	PP_4775	conserved protein of unknown function

ATACCCGCCATTTGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCGGGCCGTTGCCCCGGGCCACCGGTTTGCCAGTGGTGAT  >  AE015451/5436920‑5437335                                                                                                                                                                                            |                                                                                                                                                                                                                                     atccccGCCATTTGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGt                                                                                                                                                                                                                                  <  2:139308/189‑1 (MQ=255) aTACCCGCCATTTGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAcccc                                                                                                                                                                                      <  1:69561/236‑1 (MQ=255)      cGCCATTTGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCg                                                                                                                                                                                    <  2:634552/233‑1 (MQ=255)           tttGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGCGTCGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAc                                                                                                                                                                                         <  2:271752/223‑1 (MQ=255)            ttGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGccc                                                                                                                                                                                                               >  1:292029/1‑200 (MQ=255)            gtGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGt                                                                                                                                                                                                                                  <  2:106091/180‑1 (MQ=255)                               gggCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAgg                                                                                                                                                        <  1:120407/236‑1 (MQ=255)                                  caaCGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAgg                                                                                                                                                        <  2:681448/231‑1 (MQ=255)                                      ggCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACC‑CACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTc                                                                                                                                                >  2:612629/1‑236 (MQ=255)                                       gCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACtttg                                                                                                                                                >  2:563445/1‑235 (MQ=255)                                                                     atTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGt                                                                                                                                                                                                                                  >  1:131149/1‑124 (MQ=255)                                                                     atTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGt                                                                                                                                                                                                                                  <  2:131147/124‑1 (MQ=255)                                                                       tCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGc                                                                                                                                         <  1:619037/211‑1 (MQ=255)                                                                       tCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCgtgt                                                                                                                 <  1:601873/235‑1 (MQ=255)                                                                        ccTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCgtgt                                                                                                                 <  1:259890/234‑1 (MQ=255)                                                                             cTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGtgcgggtcagttatctgccgccttacgcgcgggaagtgtggtt                                                                                                                                                                                           <  1:296787‑M1/155‑44 (MQ=255)                                                                             cTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGTGTcaccac                                                                                                                                                                                                                            >  2:37041/1‑122 (MQ=255)                                                                             cTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTcc                                                                                                                                               >  2:271549/1‑199 (MQ=255)                                                                             cTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTgt                                                                                                          >  2:408507/1‑235 (MQ=255)                                                                             cTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTgg                                                                                                          >  1:429747/1‑236 (MQ=255)                                                                               gTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGtgcgggtcagttatctgccgccttacgcgccggaagtgtggttgggc                                                                                                                                                                                       >  2:637864‑M1/1‑110 (MQ=255)                                                                               gTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAcc                                                                                                                                                                                        <  2:554144/156‑1 (MQ=255)                                                                               gTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAcc                                                                                                                                                                                        >  1:554146/1‑156 (MQ=255)                                                                               gTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGc                                                                                                        >  1:507096/1‑236 (MQ=255)                                                                                   gCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGa                                                                                                                                 >  2:656662/1‑207 (MQ=255)                                                                                                 aTAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGc                                                                                       <  1:191028/235‑1 (MQ=255)                                                                                                     gcaTCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTa                                                                                                                                                                                                 <  2:243127/123‑1 (MQ=255)                                                                                                      tATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAg                                                                                 >  1:721860/1‑236 (MQ=255)                                                                                                         cGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGccccc                                                                                   >  1:719641/1‑231 (MQ=255)                                                                                                           gcaaccaGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCGCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAg                                                                                                                                          >  2:433095/4‑174 (MQ=255)                                                                                                           gCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGGCACCACGag                                                                                                                                                                                                                         >  2:191026/1‑94 (MQ=255)                                                                                                                   aaagaaCAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGaa                                                                                                                                                                            >  1:151840/1‑132 (MQ=255)                                                                                                                          aGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTACCCCCCGGAGTAGAAATAGTCAg                                                                                                                                                                    <  2:707760/133‑1 (MQ=255)                                                                                                                               accaccCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGgcg                                                          <  2:553351/234‑1 (MQ=255)                                                                                                                                 caccCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGc                                                                                                               <  1:187592/179‑1 (MQ=255)                                                                                                                                      aaCCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGtgcgggtcagttatctgccgccttacgcgcgggaagtgtggttgggtggtgcgctgttctttctggtggccgatacctattaccagtacctggcagacag                                                                                                                                  <  2:296785‑M1/155‑101 (MQ=255)                                                                                                                                      aaCCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAg                                                                                 <  2:779336/204‑1 (MQ=255)                                                                                                                                         cacaCTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGc                                                                          >  1:34350/1‑208 (MQ=255)                                                                                                                                                  cgcgcgTACGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGc                                                                                             <  2:248097/180‑1 (MQ=255)                                                                                                                                                  cgcgcgTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCggg                                     <  1:612631/236‑1 (MQ=255)                                                                                                                                                                               cACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCGGGCCGGTGCCCCGGGc                       >  2:438020/1‑221 (MQ=255)                                                                                                                                                                                ccGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAc                                                                                                                                                                                         <  2:347260/57‑1 (MQ=255)                                                                                                                                                                                ccGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAAc                                                                                                                                                                                         >  1:347262/2‑58 (MQ=255)                                                                                                                                                                                  gCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGCCGCCCCTGCCAGTCCCCACCGGGCCGTTGCCCCGGGCCAcc                   >  1:704704/1‑222 (MQ=255)                                                                                                                                                                                    cGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGccc                                                       <  1:37041/184‑1 (MQ=255)                                                                                                                                                                                     gTACGGCGtgcgggtcagttatctgccgccttacgcgcgggaagtgtggttgggtggtgcgctgttctttctggtggccgatacctattaccagtacctggcagacagccaggaatatgtggtggtcaacccgccggtcggcgtgccgtcgcccgtgccggtggccccggcaaatggcgg                                                          >  2:29721‑M1/1‑8 (MQ=255)                                                                                                                                                                                     gTACGGCGtgcgggtcagttatctgccgccttacgcgc                                                                                                                                                                                                        <  2:178481‑M1/38‑31 (MQ=255)                                                                                                                                                                                        cggcggGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCGGGCCGTTGCCCCGGGCCACCGGTTTGCCAGTGGTGat  <  2:721858/233‑1 (MQ=255)                                                                                                                                                                                          gcggGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCGGGCCGTTGCCCCGGGCCACCGGTTTGCCa          <  1:205521/223‑1 (MQ=255)                                                                                                                                                                                          gCGtgcgggtcagttatctgccgccttacgcgcgggaagtgtggttgggtggtgcgctgttctttctggtggccgatacctattaccagtacctggcagacagccaggaatatgtggtggtcaacccgccggtcggcgtgccgtcgcccgtgccggtggccccggcaaatggcgggtatgacgtggtggcttatccgatgtatgg                            <  1:139310‑M1/205‑203 (MQ=255)                                                                                                                                                                                            |                                                                                                                                                                                                                                     ATACCCGCCATTTGCCGGGGCCACCGGCACGGGCGACGGCACGCCGACCGGCGGGTTGACCACCACATATTCCTGGCTGTCTGCCAGGTACTGGTAATAGGTATCGGCCACCAGAAAGAACAGCGCACCACCCAACCACACTTCCCGCGCGTAAGGCGGCAGATAACTGACCCGCACGCCGTACGGCGGGGTCACCACGATGTAACGGCCCCCGTGCGGGCGGTACCAGTAACCCCCGGAGTAGAAATAGTCAGCGCCCCGGTAGGGTACTTTCCAGTAGCGGTCAGGAAAATGATCCACCGTGTGCCCTGGGCGATACTGCGGCCCAGGCCCCCAGCCATTGCCATGGCCATCCGGGCGCCCCTGCCAGTCGCCACCGGGCCGTTGCCCCGGGCCACCGGTTTGCCAGTGGTGAT  >  AE015451/5436920‑5437335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.