| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 1030530 = | 36 (0.820) | 4 (0.100) | 4/322 | NT | 10.5% | coding (588/1353 nt) | PP_0887 | Sensor histidine kinase |
| ? | AE015451 | 1030592 = | 34 (0.830) | coding (650/1353 nt) | PP_0887 | Sensor histidine kinase | |||||
CTGGTGCCGCTGGCGATCGCTGCGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAGGTAAAGCTGTGCAAAGA > AE015451/1030360‑1030799 | cTGGTGCCGCTGGCGATCGCTGCGGTGCCCTTGCCGTGGCTGTATTCGCTGCTCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGagca < 1:148213/236‑1 (MQ=255) cGCTGGCGATCGCTGCGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGc > 1:359197/1‑234 (MQ=255) cGCTGGCGATCGCTGCGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCg > 1:204249/1‑235 (MQ=255) ttGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCt < 1:115727/236‑1 (MQ=255) tGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTgcgc > 2:631368/1‑215 (MQ=255) ggCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTgaaga > 2:583048/1‑200 (MQ=255) ttGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCTTGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATCGACGAAGAGCTGCGCGGCCAGGAGCATCTGCGt > 2:498109/1‑179 (MQ=255) tACAGCGTGCTGCTGGTGCAGTTCGACCCGCTCGAAGGGCGGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTgccgc < 1:56462/236‑1 (MQ=255) gctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTgg > 1:389176/1‑236 (MQ=255) gctgGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTgg > 1:492764/1‑236 (MQ=255) cGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGAt > 1:639825/1‑235 (MQ=255) ggCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTGAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACg < 1:755289/236‑1 (MQ=255) cgcgGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGTCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCa < 2:452062/216‑1 (MQ=255) cgtcgcgcagtctttcttcacgccgctctgaacgcagctgctcctggcggcgcagctcttcggccatgcgcgcggcaaaaaaggtgatcacagccgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTgcg < 2:355720‑M2/37‑1 (MQ=255) gtcgcgcaggctttcttcacgccgctctgaacgcagctgctCCTGGCGGCGGCTGTGCTCACCCTTTTCGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCag < 1:641683‑M1/77‑1 (MQ=255) gACAAGATGCAGGTCTACGGCTCGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCATCTGCGTTCACAGCGGCCTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTAGGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATg < 2:758899/234‑1 (MQ=255) cgcaggctttcttcacgccgctctgaacgcagctgctCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGACTGCGcgacg < 2:355720‑M1/104‑1 (MQ=255) cgggTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCGCCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGGGCAGCTGCGTTCAGAgcg < 2:9529/108‑1 (MQ=255) tCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGc < 1:453098/203‑1 (MQ=255) tCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGc > 2:453096/1‑203 (MQ=255) tCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCacac > 1:9043/1‑235 (MQ=255) ggCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATg < 1:262100/216‑1 (MQ=255) cATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCg > 1:618921/1‑235 (MQ=255) cATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCg > 1:350250/1‑235 (MQ=255) cATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCGTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAAct > 1:91829/1‑129 (MQ=255) ctgaacgcagctgctcctggcggcgcagctcttcggccatgcgcgcggcgaaaagggtgagcacagccgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGcgac < 1:641683‑M2/41‑1 (MQ=255) cTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTg > 2:280633/1‑234 (MQ=255) ttGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCagg < 1:359332/231‑1 (MQ=255) tGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGccg > 1:736901/1‑221 (MQ=255) cctggcggcgcagctcttcggccatgcgcgcggcaaaaaaggtgatcacagccgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCgg < 1:49652‑M2/76‑1 (MQ=255) cctggcggcgcagctcttcggccatgcgcgcggcaaaaaaggtgatcacagccgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCgg > 2:49652‑M2/63‑138 (MQ=255) cTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAg > 1:757693/1‑236 (MQ=255) tCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCCACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGAc > 1:144968/1‑233 (MQ=255) cACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAg < 1:40246/235‑1 (MQ=255) cTTTTTTGCCGCGCGCAGGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGcgac < 2:242562/82‑1 (MQ=255) tttttGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAGGTAAAg < 1:490051/236‑1 (MQ=255) ccGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAGGTAAAGCtgtg < 1:736957/235‑1 (MQ=255) gcgcgcATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAAtc < 1:399947/210‑1 (MQ=255) cgcATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCg > 2:736955/1‑183 (MQ=255) cgcATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAGGTAAAGCTGTGCAAaga > 1:717837/1‑236 (MQ=255) cATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACg < 2:204247/155‑1 (MQ=255) cgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGGTCAACGAAATGCGCCAGGACCACACCGACACGCTGTTGCAGGAGGACCCGCAAATCCGCCCGGACCAg > 2:177280‑M2/11‑201 (MQ=255) cgccgccaggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGAc > 1:807758‑M2/11‑153 (MQ=255) ccaggAGCAGCTGCCTTCCGAGCGGCGTGAAGAAAGCCTGCGCGACGTGCAACTGCTGGCTGTGGCTACCCAGGCCGCCgg < 2:460255‑M2/76‑1 (MQ=255) ggAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGCAATGCGCCAGGACCACACCGACCCGCTGTTGCCGGAGGACCTGCAAATCCTCCAg > 2:45326‑M2/3‑187 (MQ=255) | CTGGTGCCGCTGGCGATCGCTGCGGTGACCTTGCCGTGGCTGTATTCGCTGATCCTGTCGGGCATTGCGCTGACGGCCTACAGCTTGCTGCTGGTGCAGTTCTACCCGCTCGAAGGGCTGCCGATGGCGCGGGACAAGATGCAGGTCTACGGCATGTGGCTGAGCATTGCCCTGGCGGCGGCTGTGATCACCTTTTTTGCCGCGCGCATGGCCGAAGAGCTGCGCCGCCAGGAGCAGCTGCGTTCAGAGCGGCGTGAAGAAAGCCTGCGCGACGAGCAACTGCTGGCTGTGGCTACCCAGGCCGCCGGTGCCGCCCATGAACTGGGTACGCCGCTGGCGACCATGAGCGTGCTGATCAACGAAATGCGCCAGGACCACACCGACCCGCTGTTGCAGGAGGACCTGCAAATCCTCCAGGACCAGGTAAAGCTGTGCAAAGA > AE015451/1030360‑1030799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |