| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | AE015451 | 5,681,415 | +CGGG | 100% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 5681415 | 1 (0.020) | 27 (0.630) +CGGG |
25/334 | NT | 96.5% | intergenic (‑133/+71) | PP_4986/PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
| ? | AE015451 | 5681416 = | 1 (0.020) | intergenic (‑134/+70) | PP_4986/PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein | |||||
ACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCT > AE015451/5681217‑5681637 | accaatagcagcgaggacggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCg < 1:413209‑M2/33‑1 (MQ=255) acggcaccgaccaggtgggtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccgtgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGccc > 1:196164‑M2/188‑202 (MQ=255) gtccaggcgttgaagcgttcaccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTcac < 1:492471‑M2/67‑1 (MQ=255) cgttgaagcgttcaccgtaatgcatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAg < 1:398077‑M2/29‑1 (MQ=255) accgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgggaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGt > 1:421319‑M2/150‑235 (MQ=255) ccgtaatacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGcc < 1:159908‑M2/56‑1 (MQ=255) ccgtaatacatgcaaacacagaccgcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTc < 1:602482‑M2/42‑1 (MQ=255) tacatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATc > 1:19423‑M2/143‑161 (MQ=255) acatgcaaacacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggct > 2:772234‑M2/142‑144 (MQ=255) aaccacagacctcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCt < 1:304466‑M2/72‑1 (MQ=255) tcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccggggctg > 2:52226‑M2/125‑128 (MQ=255) tcctgaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGc > 1:305227‑M2/125‑234 (MQ=255) gaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTca > 1:287729‑M2/121‑186 (MQ=255) gaggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc > 1:150305‑M2/121‑236 (MQ=255) ggtgggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATcc > 1:29181‑M2/119‑189 (MQ=255) ggctgggttcctgttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGc < 1:225569‑M2/104‑1 (MQ=255) gttgtgatgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTgcgc < 1:371089‑M2/62‑1 (MQ=255) gttgtgatgctgatggcttcggtcttggtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGc < 1:131122‑M2/121‑1 (MQ=255) ttgtGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGCCGGGGCTGCTGCGCAGCCCTATCGCGACACCAGGccc > 2:942/1‑133 (MQ=21) atgctgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCCAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTc > 1:64259‑M2/97‑226 (MQ=255) tgatggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACaa < 1:474028‑M2/28‑1 (MQ=255) atggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGGACCCGCGCCAc > 1:104795‑M2/91‑235 (MQ=255) ggcttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCa > 1:166584‑M2/89‑205 (MQ=255) cttcgttctttgtgggagcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCt < 1:613504‑M2/72‑1 (MQ=255) agcggccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCAcc < 1:233703‑M2/164‑1 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTcc < 1:129117‑M2/116‑1 (MQ=255) ccttgtgtcgcgaaaggggcgcgaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCCATGCGACCAGGTCCGGCACCCGCGCCACCTGCTCCCCCACCTGCACCGCTGc > 1:258233‑M2/66‑234 (MQ=255) gaagcggccccaggctttcattgccactgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAgcgc > 2:688281‑M2/44‑233 (MQ=255) tgcatgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCg < 2:19423‑M2/122‑1 (MQ=255) atgaaccgccgggGCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCt > 1:431523‑M2/14‑235 (MQ=255) cgccgggGCTGCTGCGCAGCCCTATCGCGACACaa < 2:317879‑M2/28‑1 (MQ=255) | ACCAATAGCAGCGAGGACGGCACCGACCAGGTGGGTCCAGGCGTTGAAGCGTTCACCGTAATACATGCAAACACAGACCTCCTGAGGTGGGCTGGGTTCCTGTTGTGATGCTGATGGCTTCGTTCTTTGTGGGAGCGGCCTTGTGTCGCGAAAGGGGCGCGAAGCGGCCCCAGGCTTTCATTGCCACTGCATGAACCGC‑‑‑‑GCTGCTGCGCAGCCCTATCGCGACACAAGGCCGCTCCCACTCCAGACCACCAGGCCCTGCGCCTCACATCCTAACCAAGGTCAGGTTGCAGATCCGCGTCACGCACCAGCCTTTCCAATGCGACCAGGTCCGGTACCCGCGCCACCTGCTCACCCACCTGCACCGCTGCCAGCTCCAACCTGCCCAGCGCCACATCCACGTAGTTCAGCTGGCTGTCGAGCT > AE015451/5681217‑5681637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |