Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	3579953	3580058	106	12 [11]	[11] 12	benR	BenABC operon transcriptional activator

TATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGCACCA  >  AE015451/3579735‑3579983                                                                                                                                                                                                                          |                                tATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGt               <  1:799131/236‑1 (MQ=255)        cgGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc                  <  2:446102/226‑1 (MQ=255)              tCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGcacc   <  1:559610/235‑1 (MQ=255)              tCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGcacc   <  1:658696/235‑1 (MQ=255)              tCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGcacc   <  1:780267/235‑1 (MQ=255)               agagacagccTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGcacca  <  1:403861/227‑1 (MQ=255)                   tGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGGTGATCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATc                  <  2:439194/215‑1 (MQ=255)                                                  aTGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTa                                 <  2:452700/169‑1 (MQ=255)                                                          gatgaCCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTg                      <  1:605538/172‑1 (MQ=255)                                                          gatgaCCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTg                      >  2:605536/1‑172 (MQ=255)                                                                                                                                                              cAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCt             >  1:232784/1‑81 (MQ=255)                                                                                                                                                              cAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCt             <  2:232782/81‑1 (MQ=255)                                                                                                                                                                                                                          |                                TATCCGCCGGCTGTCGCCTGCCCCTGCGACGCGCTGCCAGCCCGATAGAATGACCGTGATGACCGCAACCACAGCCCACAAGGCGGTAGGGCGCGGCGACCAGAACAATAACGATACCGAGTGCCTTGCCTATGGAAAGCCGCCTGCTGAGCGAGCGCAGTAGCGTGTTTCACCACGCCGACCCTTACGCTGTGTCCGATTATGTGAACCAGCATGTAGGCCAGCATTGCATCGGTCTGTCCCGCACCA  >  AE015451/3579735‑3579983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑