New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	470897 =	19 (0.740)	3 (0.120)	3/304	NT	13.6%	coding (60/3744 nt)	PP_0386	Sensory box protein
	?	AE015451	470946 =	20 (0.810)					coding (11/3744 nt)	PP_0386	Sensory box protein

GCCAGCACCTCGGTCCAGCTGCTGGGTTCGACCGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCG  >  AE015451/470688‑471124                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    gcCAGCACCTCGGTCCAGCTGCTGGGTTCGACCGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAg                                                                                                                                                                                                           <  1:152155/236‑1 (MQ=255)                cAGCTGCTGGGTTCGACCGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAAt                                                                                                                                                                                            <  1:296312/236‑1 (MQ=255)                       gcgccacccgactcgcagcgagcacctgcgctccttcctcgacgagtgatgacaaaaccccggcccaggccggggtttttctttagtggcccgtgacataaagcccgccttccgttgcacacctgcggcaatgcccgtctacactcgacttcagaccacctgagtgcgaggctgccatgtccttgaagccggcc                                                                                                                                                                                                                               <  1:204119‑M1/7‑1 (MQ=255)                           ttCGACCGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCtt                                                                                                                                                                                   >  1:500700/1‑234 (MQ=255)                                ccGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTtg                                                                                                                                                                                                                           <  1:8900/189‑1 (MQ=255)                                   gTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCaa                                                                                                                                                                                                  >  1:146866/1‑211 (MQ=255)                                                 cccAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAACGACATGGCAGcc                                                                                                                                                                   >  1:338150/1‑228 (MQ=255)                                                               gATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGt                                                                                                                                             <  1:149885/236‑1 (MQ=255)                                                                                            ccTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAAt                                                                                                                                                                                            <  1:466045/160‑1 (MQ=255)                                                                                                    tttctttagtggcccgtgacataaagcccgccttccgttgcacacctgcggcaatgcccgtctacactcgacttcagaccacctgagtgcgaggctgccatgtccttgaaGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCt                                                                                                                                                                                    >  2:364367‑M1/111‑160 (MQ=255)                                                                                                         ctcctGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATc                                                                                                                                                                                                       >  2:501774/1‑136 (MQ=255)                                                                                                         ctcctGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATc                                                                                                                                                                                                       <  1:501778/136‑1 (MQ=255)                                                                                                         ctcctGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGa                                                                                                                                                >  2:465723/1‑191 (MQ=255)                                                                                                         ctcctGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTa                                                                                                                                     >  2:182906/1‑202 (MQ=255)                                                                                                                       aCTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACg                                                                                     >  1:269983/1‑236 (MQ=255)                                                                                                                                    ttccgttgcacacctgcggcaatgcccgtctacactcgacttcagaccacctgagtgcgaggctgccatgtccttgaaGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCgcc                                                                                                                     <  2:178887‑M1/113‑2 (MQ=255)                                                                                                                                     cAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAg                                                                                                                    >  2:207099/1‑191 (MQ=255)                                                                                                                                                      aaGGTTCAGGTGCGGGTGGGCAGCCAGGCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTGCCACAAAATCAGGATCAGCAGCAGAATGGCCGGCTTCAAGGACATGGCAGcc                                                                                                                                                                   <  2:98378/127‑1 (MQ=255)                                                                                                                                                           tCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGtt                                                 >  1:135633/1‑236 (MQ=255)                                                                                                                                                                             ccagccagGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGa                                <  1:197866/235‑1 (MQ=255)                                                                                                                                                                                              gcATCGGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATg                                                                                          <  2:321789/159‑1 (MQ=255)                                                                                                                                                                                                   tgccatgtccttgaaGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTAt                                                                                           <  2:283287‑M1/139‑1 (MQ=255)                                                                                                                                                                                                          gtcagggCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCg  >  1:104815/1‑236 (MQ=255)                                                                                                                                                                                                             agggCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGcc                                                                                 >  2:462723/1‑154 (MQ=255)                                                                                                                                                                                                              gggCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAATAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGtcatc                                         <  1:223200/193‑1 (MQ=255)                                                                                                                                                                                                                  |                                                                                                                                                                                                                                    GCCAGCACCTCGGTCCAGCTGCTGGGTTCGACCGGTTTGAACGTCACGCCCAGGCGCTGCTGGATCATGGCGATGTAGTCGGCGGCCAATCCCTGGTACCGGCCCTCCTGGTCGCGAAACTCGAACGGTGGCCAAGAGGCGTCTACGCCAAGTTTCAGCTGCGGGTGGGCAGCCAGCCAGGCGTTCTCCTCATCTGTCAGGGTCAGGGCGCCGGCCGTTGTGTTCCACAAAATCAGGATCAGCAACAGAATGGCCGGCTTCAAGGACATGGCAGCCTCGCACTCAGGTGGTCTGAAGTCGAGTGTAGACGGGCATTGCCGCAGGTGTGCAACGGAAGGCGGGCTTTATGTCACGGGCCACTAAAGAAAAACCCCGGCCTGGGCCGGGGTTTTGTCATCACTCGTCGAGGAAGGAGCGCAGGTGCTCGCTGCGAGTCG  >  AE015451/470688‑471124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.