New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3614175	24 (0.930)	3 (0.120)	3/304	NT	11.3%	coding (48/648 nt)	pet	Pet18 protein
	?	AE015451	= 3614176	24 (0.970)					coding (49/648 nt)	pet	Pet18 protein

GAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACGAGAACACTTACTTCCTGCG  >  AE015451/3613966‑3614396                                                                                                                                                                                                                   |                                                                                                                                                                                                                             gagaAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGtt                                                                                                                                                                                                      <  2:216964/235‑1 (MQ=255)       ccGCTGAACGCTGCAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTggtcggctcgctctggcgg                                                                                                                                                                                                           >  1:369407‑M2/1‑205 (MQ=255)                       cgcgGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACgg                                                                                                                                                                                <  2:269980/235‑1 (MQ=255)                               cccTCCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCg                                                                                                                                                                                                        <  1:455723/203‑1 (MQ=255)                                                   tCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCTGCCTGCCTGACCCGATCATGGTCGACt                                                                                                                                                   <  1:282362/236‑1 (MQ=255)                                                    cATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGAccc                                                                                                                                                                                             >  2:437871/1‑193 (MQ=255)                                                    cATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGAccc                                                                                                                                                                                             <  1:437875/193‑1 (MQ=255)                                                     aTGCCGGCGAAGGGATGGTGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGACAATTGCCAACGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTggtcggctcgctctggcggcgcagggactggctgaaacgttcggtcatgttgctgtccttgatgagggtgac                                                                                                                                                      >  1:69282‑M2/1‑159 (MQ=255)                                                                 ggATGGGGCTTGTAACCTGCCTGTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAgcc                                                                                                                                                                           <  1:500546/198‑1 (MQ=255)                                                                                                             ccAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTTGGCGCGGCCAt                                                                                         >  1:325024/1‑236 (MQ=255)                                                                                                                  ccATGTCAATTGCCAAGGTCTCGCCGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTggtcggctcgctctggcggcgcagggactggctgaaacgttcggtcatgt                                                                                                                                                                            >  2:380308‑M2/1‑98 (MQ=255)                                                                                                                   cATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAgcc                                                                                                                                                                           >  2:439956/1‑148 (MQ=255)                                                                                                                   cATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAgcc                                                                                                                                                                           <  1:439960/148‑1 (MQ=255)                                                                                                                              ccAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGa                                                                                                                       <  1:126705/189‑1 (MQ=255)                                                                                                                              ccAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGa                                                                                                                       >  2:126701/1‑189 (MQ=255)                                                                                                                              ccAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGcc                                                                                           >  1:230534/1‑217 (MQ=255)                                                                                                                              ccAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCAt                                                                                         >  2:420883/1‑219 (MQ=255)                                                                                                                              ccAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGt                                                                        <  1:423701/236‑1 (MQ=255)                                                                                                                                                 cTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTgcg                                                        >  2:188112/1‑233 (MQ=255)                                                                                                                                                               cAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGTCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGAc                                                                                                                      >  2:252504/1‑157 (MQ=255)                                                                                                                                                                 aCATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCgg                                                                                             >  2:275157/1‑180 (MQ=255)                                                                                                                                                                                    ccAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACgaga                  >  1:274220/1‑236 (MQ=255)                                                                                                                                                                                             gcgcCGCCAGAGCGACCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGAc                      <  2:495549/223‑1 (MQ=255)                                                                                                                                                                                                  gccAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACGAGAACACTTACTTCCTg    <  1:174865/236‑1 (MQ=255)                                                                                                                                                                                                     agagCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACGAGAACACTTACTTCCTGCg  >  1:216152/1‑235 (MQ=255)                                                                                                                                                                                                           agcCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACGAGAACacttactt        >  1:264338/1‑223 (MQ=255)                                                                                                                                                                                                            gcCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCg                                                                                                                                                                                    >  2:419398/1‑50 (MQ=255)                                                                                                                                                                                                                   |                                                                                                                                                                                                                             GAGAAACCGCTGAACGCTACAGCGCGGTGACCCTTCGAACCTGATCCGGATCATGCCGGCGAAGGGATGGGGCTTGTAACCTGCCTTTTTGCCGGCCTCACTGCGAGGCCAGTCCATGTCAATTGCCAAGGTCTCGCTGTCACCCTCATCAAGGACAGCAACATGACCGAACGTTTCAGCCAGTCCCTGCGCCGCCAGAGCGAGCCGACCTGGTCGGCGGCCGTTGGCCACCGTTTCGTGACCCGATTGTGCGACGGCAGCCTGCCTGACCCGATCATGGTCGACTACCTGGTCCAGGACCACCGTTTCCTCGACAGCTTCCTGACCCTGCTGGGCGCGGCCATCGCCACCGCTGACACGTTTGAAGCCCGCCTGCGCTTCGGCCGTTTTGCCGGGATGATCTCCAGTGACGAGAACACTTACTTCCTGCG  >  AE015451/3613966‑3614396

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.