Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	5401417	5401533	117	5 [4]	[4] 5	PP_4743/PP_4745	conserved protein of unknown function/transposase

GCACGGCCGCCATGAGCAAAGTGTGTAACTACCCCACCCGCCCCCCTAAACGCATCGTACGCCGCTACCGGCAAGCTGATCCCCTCACGAACCGCACGAGCATAAGATTGCTCTTTACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCCCAGCCCCAGGCGATTCACTACCAGCACGGAAATCCGCTGCATCCAGCGACCAATTG  >  AE015451/5401181‑5401465                                                                                                                                                                                                                                            |                                                  gCACGGCCGCCATGAGCAAAGTGTGTAACTACCCCACCCGCCCCCCTAAACGCATCGTACGCCGCTACCGGCAAGCTGATCCCCTCACGAACCGCACGAGCATAAGATTGCTCTTTACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCCCAGcccc                                                   <  1:236255/236‑1 (MQ=255)                                                                      ggCAAGCTGATCCCCTCACGAACCGCACGAGCATAAGATTGCTCTTTACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCCCAGCCCCAGGCGATTCACTACCAGCACGGAAATCCGCTGCATCCAGCGACCAATTg  <  2:419309/216‑1 (MQ=255)                                                                            cTGATCCCCTCACGAACCGCACGAGCATAAGATTGCTCTCTACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCCCAGCCCCAGGCGATTCACTACCAGCACGGAAATCCGCTGCATCCa             <  2:330247/199‑1 (MQ=255)                                                                                                                    tACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCACAGCCCCAGGCGa                                             <  1:283189/127‑1 (MQ=255)                                                                                                                                 cAAGTAAACCCCCAAGGCTTCAAGCCGAGCGATCTGCTGGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGTGAGCAATACCAACCACTAGCATGCCAGCCCCAGGCGATGCACTACCAGCa                                >  2:283185/1‑127 (MQ=255)                                                                                                                                                                                                                                            |                                                  GCACGGCCGCCATGAGCAAAGTGTGTAACTACCCCACCCGCCCCCCTAAACGCATCGTACGCCGCTACCGGCAAGCTGATCCCCTCACGAACCGCACGAGCATAAGATTGCTCTTTACCCTTCCCCGGCAAGTAAACCCCCAAGGCTTCAAGCCGAGCCATCTGCTCGCCCAACCTTAAAGCAAAGCACTCATCCAGCAACCTGGGAGCAATACCAACCACTAGCATCCCAGCCCCAGGCGATTCACTACCAGCACGGAAATCCGCTGCATCCAGCGACCAATTG  >  AE015451/5401181‑5401465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑