| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | AE015451 | 1,962,159:1 | +C | 7.4% | coding (422/1833 nt) | PP_1760 → | ABC transporter, ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AE015451 | 1,962,159 | 1 | . | C | 7.4% | 218.8 / 11.3 | 54 | coding (422/1833 nt) | PP_1760 | ABC transporter, ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (26/24); new base C (2/2); total (28/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 | |||||||||||
TCTGCTCGGCCATGGCGATGCTGCGCTGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCACCGTGCAGTTGGGCAA > AE015451/1961935‑1962384 | tCTGCTCGGCCATGGCGATGCTGCGCTGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGt < 1:818470/236‑1 (MQ=255)tCTGCTCGGCCATGGCGATGCTGCGCGGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGt < 1:373082/236‑1 (MQ=255) tCGGCCATGGCGATGCTGCGCTGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGt < 1:95001/231‑1 (MQ=255) cATGGCGATGCTGCGCTGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCt > 1:300491/1‑236 (MQ=255) tGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑Gc < 2:829354/196‑1 (MQ=255) aTCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGTCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGACTCAAGCGTATTTC‑GCTGCAagag > 2:187320/1‑194 (MQ=255) gtgccGTCCAGCTGGCAGGGGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtgg > 2:81664‑M2/2‑226 (MQ=255) tGGCGGGGGGCGGCCGGCTACATCGGCCTGATGCTGGCGCTCCCCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGt < 2:346014/178‑1 (MQ=255) tGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGCCACCGACCTGGACACCCCCGCCaa > 1:256739/1‑235 (MQ=255) aGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCt > 2:656231/1‑225 (MQ=255) cTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtggtcaccgtgccgctgcccaggctttcgtactctttcagcgaaatacgcctgt < 1:156711‑M2/236‑55 (MQ=255) cTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtggtcaccgtgccgctgcccaggctttcgtactctttcagc < 1:156709‑M2/223‑42 (MQ=255) cTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCtt > 1:558381/1‑236 (MQ=255) ccTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGcc < 1:438706/235‑1 (MQ=255) ccTGGGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGGTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtgg > 2:722554‑M2/1‑170 (MQ=255) cTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACcacccaccg > 2:432977/1‑157 (MQ=255) cTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGCCAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACt > 2:778622/1‑233 (MQ=255) cTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGAc > 1:940555/1‑236 (MQ=255) ggCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGAcc > 1:1030842/1‑235 (MQ=255) cTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCg > 2:984962/1‑234 (MQ=255) tGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑Gc > 2:296041/1‑107 (MQ=255) tGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑Gc < 1:296044/107‑1 (MQ=255) gCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCAc > 1:1008529/1‑236 (MQ=255) cAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCtggt < 1:213028/191‑1 (MQ=255) aaGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtgg < 1:843728‑M2/127‑4 (MQ=255) aaGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtgg > 2:843725‑M2/1‑124 (MQ=255) aaGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtgg > 2:4044‑M2/1‑124 (MQ=255) tGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAg > 1:975669/1‑236 (MQ=255) gTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCa > 2:400770/1‑234 (MQ=255) aaGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCAC < 2:238984‑M1/89‑1 (MQ=255) ctctccCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtggtcaccgtgccgctgcccaggctttcgtactctt > 2:156707‑M2/2‑95 (MQ=255) cTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGcc < 1:223825/157‑1 (MQ=255) cTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAAcc < 1:367651/236‑1 (MQ=255) tACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAggtgggtggtcaccgtgccgctgcccaggctttcgtactctttcagcgaaatacgcttgaggcgctcgatcaggcggatgcgcaggcgg > 1:168650‑M1/1‑85 (MQ=255) ccGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtggtcaccgtgccgctgcccaggctttcgtactctttcagcgaaatacgcttgaggcgctcgatcaggcggatgcgcaggcggta > 1:168650‑M2/1‑89 (MQ=255) cGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCtggtcaccgtgccgctgcccaggctttcgtactctt > 2:156709‑M2/1‑89 (MQ=255) cGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCt > 1:303417/1‑236 (MQ=255) cGCCAGCGCATCCGCCTGATCGAGCGCCTCAGGCGTATTTC‑GCTGAAAGAGTACGAAGGCCTGGGCAGCGGCACGGTGACCACCCGCCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCt < 2:350992/211‑1 (MQ=255) tccTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCAcgg < 1:84517/173‑1 (MQ=255) gCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTg < 1:834816/236‑1 (MQ=255) ccTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAAccc > 1:493692/1‑231 (MQ=255) gcgcATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCATCCCGCTGGTGa > 1:885032/1‑236 (MQ=255) cATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCCCCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCt < 1:326351/236‑1 (MQ=255) ccGCCTGATCGGGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCCCCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCAcggcg < 2:336803/166‑1 (MQ=255) gCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCCACCCg > 1:939852/1‑221 (MQ=255) gATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCa < 2:951074/233‑1 (MQ=255) gcCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCt < 2:170295/85‑1 (MQ=255) gcCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCt > 1:170297/1‑85 (MQ=255) cTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCACCGTGCAGTTgg < 1:1023445/235‑1 (MQ=255) tCAGGCGTATTTC‑GCGGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCACCGTGCAGTTgg < 2:818177/234‑1 (MQ=255) acaggcgtaTTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAggtgggtggtcaccgtgccgctgcccaggctttcgtactctttcagcggaaatacgcttgaggcgctcgatcaggcggatgcgcaggcggtagacgatgtccttggccagcccggcgaacagcttggactggataacgttgaacgccagtgcagccaggcgcaggcacagggtgagcgccag < 1:156711‑M1/232‑183 (MQ=255) gCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCACCGTGCAGTTGGGCaa > 2:356836/1‑234 (MQ=255) agttC‑GCCGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCGCCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGc < 2:142706/158‑1 (MQ=255) aTTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAAcc < 2:1088809/196‑1 (MQ=255) | TCTGCTCGGCCATGGCGATGCTGCGCTGAAGTGGATGAACCATCTGCTGCCGTCCAGCTGGCAGGTGGCAGCCGGCTACATCGGCCTGATGCTGGCGCTCACCCTGTGCCTGCGCCTGGCTGCACTGGCGTTCAACGTTATCCAGTCCAAGCTGTTCGCCGGGCTGGCCAAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTC‑GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCACCCACCTGGTCACCGACCTGGACACCCTCGACAAGTTCGTTGGCGAAACCCTCAGCCGCTTCCTGGTGGCCATGCTGACACTGACCGGCACGGCGGCCATCCTGATCTGGATGCACTGGCAGCTGGCCTTGCTGATCTTGCTGTTCAACCCGCTGGTGATCTACTTCACCGTGCAGTTGGGCAA > AE015451/1961935‑1962384 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |