New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 294643 =55 (0.950)4 (0.070) 4/326 NT 7.2% coding (47/813 nt) ssuB Aliphatic sulfonates import ATP‑binding protein SsuB
?AE015451 294683 = 50 (0.910)coding (87/813 nt) ssuB Aliphatic sulfonates import ATP‑binding protein SsuB

GCCGCGCGTCCTGGAACATCAGGCGGGTTTCTTCACGGGCCTCTTCCAGCGGCGCGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/294882‑294643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgCGAAGTTCTGAAGGGTATCGACCTGCACATTC  >  AE015451/294683‑294714
                                                                                                                                                                                                                                                                                
GCCGCGCGTCCTGGAACATCAGGCGGGTTTCTTCACGGGCCTCTTCCAGCGGCGCGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAG                                         >  2:372264/1‑233
                                                    CGCGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCGCGAAGTTCT                         <  1:975713/197‑1
                                                    CGCGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCGCGAAGTTCT                         >  2:975710/1‑197
                                                      CGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCG                                  <  2:437260/186‑1
                                                                                                                          TTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCGCGAAGTTCTGAAGGGTATCGACCTGCACATTC  <  1:441836/150‑1
                                                                                                                          TTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCGCGAAGTTCTGAAGG                    <  2:573028/132‑1
                                                                                                                                                                                                                                                                                
GCCGCGCGTCCTGGAACATCAGGCGGGTTTCTTCACGGGCCTCTTCCAGCGGCGCGGCACCGGCCAGCAGCTGCCCGGCGGTGGGCTGGTCCAGCCCGGCCAGCAGCCGCAGCAAAGTGCTCTTGCCGCAGCCGCTGCGGCCGACAATGGCCACGAACTGGCCGGCCGGAATGTGCAGGTCGATACCCTTCAGAACTTCGCGCTGGCCAAAGGTCTTGCGCAGGCCCTTGGAGGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/294882‑294643
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcgCGAAGTTCTGAAGGGTATCGACCTGCACATTC  >  AE015451/294683‑294714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.