New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	300399 =	50 (0.870)	4 (0.070)	4/326	NT	7.5%	coding (727/2586 nt)	yhgF	putative transcriptional accessory protein
	?	AE015451	300509 =	51 (0.930)					coding (617/2586 nt)	yhgF	putative transcriptional accessory protein

AACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/300635‑300399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGGCGCGGCGCTCGTCGAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGGTGGCGCAACTGAGTGTCGTCAAGGCTACCGGT  >  AE015451/300509‑300738                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCC                                                                                                                                                                                                                                         >  1:917040/1‑236                                                       AGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCA                                                                                                                                                                                                                                              <  2:713376/177‑1                                                           CCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCA                                                                                                                                                                                                                                              <  2:917037/173‑1                                                                        CTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGC                                                                                                                                                                                                                             <  1:866895/177‑1                                                                              CTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTG                                                                                                                                                                                                             <  2:614662/187‑1                                                                                                                                                                         CCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCCGTTCCGGGGTCAGCTTGGCCTGTTCCTCGATGCTGGAAAGGA                                                                                       >  1:88389/1‑214                                                                                                                                                                                             GCCGCACGCTGCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCT                                                                                                                                                <  1:646497/137‑1                                                                                                                                                                                                                                 GACATCACGGCCGGCTTCCATGGCCGTCTGGCCCTTGGTGCGGCGCTTCTGCTTGTCCGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTG                                                                                                                                                          <  2:851872/91‑1                                                                                                                                                                                                                                         GGCCGGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGGCGCGGCGCTCGTCGAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGGTGGCGCAACTGAGTGTCGTCAAGGCTACCGGT  >  1:486854/1‑235                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACAGGGCAAGCTGACCCCGGAACTGGCCCGCGAGATCAAGCTGGCCGACACCAAGACCCGCCTCGAAGACCTGTACCTGCCGTACAAGCAGAAGCGCCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTTGGCGAACTGGCCGATGGCCTGTTCAACGACCCGACCCTGGCCCCGGAAAGCGAAGCCGCACGCTTCGTCAACGCCGAAAAGGGCGTGGCCGACGTCAAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/300635‑300399 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caaggccgGCTTCCAGGGCGATCTGGCCCTTGGTGCGGCGCTTCTGCTTGTACGGCAGGTACAGGTCTTCGAGGCGGGTCTTGGTGTCGGCCAGCTTGATCTCGCGGGCCAGTTCCGGGGTCAGCTTGCCCTGTTCCTCGATGCTGGAAAGGATGCTGGCGCGGCGCTCGTCGAGTTCGCGCAGGTAGCGCAGGCGCTCTTCCAGGTGGCGCAACTGAGTGTCGTCAAGGCTACCGGT  >  AE015451/300509‑300738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.