New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 449057 = | 51 (0.880) | 4 (0.070) | 4/326 | NT | 7.5% | coding (228/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein |
? | AE015451 | 449107 = | 50 (0.910) | coding (278/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein |
ATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/449297‑449057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgggTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCC > AE015451/449107‑449318 ATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGGGTTGTAGGCTTCAATGAAACCG > 2:795176/1‑235 CTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 2:454863/202‑1 ACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG < 1:65158/120‑1 ACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCG > 2:65156/1‑120 CAGCGGGTCGCCCCCCCCGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTAAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGG < 1:225915/104‑1 AGCCGCCTTCGGCGTAGGTGTTGTAGGCTCCAATGAAACCGGC > 1:211536/1‑43 CGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCG < 1:860954/94‑1 CGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCG > 2:860951/1‑94 TGAAACCGGCTGGGTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCC > 1:952739/1‑226 ATACATGTTCGGAAGGTATTTTTCCTTCAAGGCCTCGCTGGCGTGGGCGTTGATCGACAGGCAGGCGCCGGCCGTCAGCATCGGGTACAGGCCGAAGGCCAGGCTGGACGCGTTGACCATTTCCTCGACCTGGGCCGAGATGGCCTTGGGCATACCCATACCGCCGAACAGCGGGTCGCCGCCCACGCCCACCCAGCCGCCTTCGGCGTAGGTGTTGTAGGCTTCAATGAAACCGGCTGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/449297‑449057 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgggTGGGCGTGGGCGGCGACCCGCTGTTCGGCGGTATGGGTATGCCCAAGGCCATCTCGGCCCAGGTCGAGGAAATGGTCAACGCGTCCAGCCTGGCCTTCGGCCTGTACCCGATGCTGACGGCCGGCGCCTGCCTGTCGATCAACGCCCACGCCAGCGAGGCCTTGAAGGAAAAATACCTTCCGAACATGTATGCCGGCGTTTGGGCCGGCTCC > AE015451/449107‑449318 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |