New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	676190 =	56 (0.970)	3 (0.050)	3/328	NT	5.4%	coding (221/750 nt)	PP_0578	putative Methyltransferase
	?	AE015451	676267 =	51 (0.920)					coding (144/750 nt)	PP_0578	putative Methyltransferase

CGAGAGGCGCTTCGCCCGATGAACGACCGTCATTTCGATGAGCTGGCCACCCGCTTTGCCGAAAAGATCTATGGCGGCGCCAAGGGTGCGATCCGCCTGGCCGTGCTGCAGGCCGACCTGGCCGAAGCGCTACCCGACCGCCCGCTACGCATCCTCGACATCGGCGCCGGGTTGGGCCACATGGCCTTGTGGCTGGCCGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/676428‑676190 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCACCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGCGGGTGGCCAGCTCATCGAAATGACGGTCGTTCATCGGGCGAAGCGCCTCTCGCTGTCGGCCAGCTTGGCACGCACCACCTG  >  AE015451/676267‑676457                                                                                                                                                                                                                                                                                                                                                                                                                                                CGAGAGGCGCTTCGCCCGATGAACGACCGTCATTTCGATGAGCTGGCCACCCGCTTTGCCGAAAAGATCTATGGCGGCGCCAAGGGTGCGATCCGCCTGGCCGTGCTGCAGGCCGACCTGGCCGAAGCGCTACCCGACCGCCCGCTACGCATCCTCGACATCGGCGCCGGGTTGGGCCACATGGCCTTGTGGCTGGCCGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCG                                                                                                                                                                                                      >  2:386717/1‑234                                                                       ATGGCGGCGCCAAGGGTGCGATCCGCCTGGCCGTGCTGCAGGCCGACCTGGCCGAAGCGCTACCCGACCGCCCGCTACGCATCCTCGACATCGGCGCCGGGTTGGGCCACATGGCCTTGTGGCTGGCCGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCGGCGCCGATGTCGAGGATGCGTAGCGG                                                                                                                                                                            <  1:53231/190‑1                                                                                                                                                                                                    GCCGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCGGCGCCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGC                                                                                                                                                               <  1:845672/78‑1                                                                                                                                                                                                      CGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCGGCGCCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCCCCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGCcg                                                                                 >  2:330101/1‑152                                                                                                                                                                                                                                        GCGGCGCCGAGGTCAAGGATGCGTAGCGGGCGGTCGGGTAGGGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCACGCTTGGCGCCGCCA                                                                                                      <  2:86956/99‑1                                                                                                                                                                                                                                          GGCGCCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCACCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGCGGGTGGCCAGCTCATCGAAATGACGGTC                                                       >  2:134070/1‑144                                                                                                                                                                                                                                            CGCCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCACCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGCGGGTGGCCAGCTCATCGAAATGACGGTCGTTCATCGGGCGAAGCGCCTCTCGCTGTCGGCCAGCTTGGCACGCACCACCTG  <  2:309632/195‑1                                                                                                                                                                                                                                              CCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCCGGCGGATCGCACCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGGGGGTGGCCAGCTCATCGAAA                                                               <  2:356426/132‑1                                                                                                                                                                                                                                              CCGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTAGGCCAGGTCGGCCTGCAGCA                                                                                                                                      >  2:810692/1‑61                                                                                                                                                                                                                                                                                                                                                                                                                                                CGAGAGGCGCTTCGCCCGATGAACGACCGTCATTTCGATGAGCTGGCCACCCGCTTTGCCGAAAAGATCTATGGCGGCGCCAAGGGTGCGATCCGCCTGGCCGTGCTGCAGGCCGACCTGGCCGAAGCGCTACCCGACCGCCCGCTACGCATCCTCGACATCGGCGCCGGGTTGGGCCACATGGCCTTGTGGCTGGCCGAGCGCGGCCACCAGCTGACCCTGGCCGAACCTGCGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/676428‑676190 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccGATGTCGAGGATGCGTAGCGGGCGGTCGGGTAGCGCTTCGGCCAGGTCGGCCTGCAGCACGGCCAGGCGGATCGCACCCTTGGCGCCGCCATAGATCTTTTCGGCAAAGCGGGTGGCCAGCTCATCGAAATGACGGTCGTTCATCGGGCGAAGCGCCTCTCGCTGTCGGCCAGCTTGGCACGCACCACCTG  >  AE015451/676267‑676457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.