New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1962200	45 (0.780)	5 (0.090)	3/324	NT	10.1%	coding (463/1833 nt)	PP_1760	ABC transporter, ATP‑binding protein
	?	AE015451	= 1962206	46 (0.840)					coding (469/1833 nt)	PP_1760	ABC transporter, ATP‑binding protein

AAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1962104‑1962200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgaccaGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCACAGGGTGAGCGCCAGCATCAGGCCGATGTAGCCGGCTGCCACCTGCCAGCTGGACGGCAG  <  AE015451/1962206‑1961981                                                                                                                                                                                                                                                                                                                                      AAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCAC                                                                                                                                                                                                                                             <  2:238984/89‑1             TACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGG                                                                                                                                           >  1:168650/1‑174                                            acagGCGTATTTCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGCGGAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCACAGGGTGAGCGCCAG                                               <  1:156711/232‑1                                                         GCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGCGGAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCACAGGGTGAGCGCCAG                                               <  1:156709/223‑1                                                              AAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGCGGAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGGAGAg                                                                                                                                      >  2:156707/1‑130                                                              AAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGCGGAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCG                                                                                                                                            >  2:156709/1‑125                                                                                               CCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGACCAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCCCAGG                                                          >  2:722554/1‑173                                                                                               CCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCACAGGGTGAGCGCCAGCATCAGGCCGATGTAGCCGGCTGCCCCCTGCCAGCTGGACGGCAc  >  2:81664/1‑228                                                                                               CCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTT                                                                                                        <  1:843728/127‑1                                                                                               CCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTT                                                                                                        >  2:4044/1‑127                                                                                               CCAGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTT                                                                                                        >  2:843725/1‑127                                                                                                                                                                                                                                                                                                                                      AAGGACATCGTCTACCGCCTGCGCATCCGCCTGATCGAGCGCCTCAAGCGTATTTCGCTGAAAGAGTACGAAAGCCTGGGCAGCGGCACGGTGACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1962104‑1962200 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtgaccaGGTGGGTGGTCACCGTGCCGCTGCCCAGGCTTTCGTACTCTTTCAGC‑GAAATACGCTTGAGGCGCTCGATCAGGCGGATGCGCAGGCGGTAGACGATGTCCTTGGCCAGCCCGGCGAACAGCTTGGACTGGATAACGTTGAACGCCAGTGCAGCCAGGCGCAGGCACAGGGTGAGCGCCAGCATCAGGCCGATGTAGCCGGCTGCCACCTGCCAGCTGGACGGCAG  <  AE015451/1962206‑1961981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.