New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 2057883 = | 65 (1.130) | 5 (0.090) | 5/316 | NT | 7.7% | intergenic (+99/+29) | PP_1832/PP_1833 | putative Oxidase/conserved protein of unknown function |
? | AE015451 | 2057988 = | 59 (1.110) | coding (227/303 nt) | PP_1833 | conserved protein of unknown function |
CCCGCCCCGATGGCGGTGTACTGCTTACCCTGCGCGCAGCGGATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2058123‑2057883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcctcttcgGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGACATGAGTTGAT > AE015451/2057988‑2058222 CCCGCCCCGATGGCGGTGTACTGCTTACCCTGCGCGCAGCGGATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCT > 1:734711/1‑236 GCCCCGATGGCGGTGTACTGCTTACCCTGCGCGCAGCGGATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTC < 2:680627/234‑1 GCAGCGGATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCT < 2:1029624/201‑1 ATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTT > 2:866074/1‑197 CCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGACGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCAACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCG > 2:1024694/1‑186 TGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTag > 2:1025652/1‑151 CTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCG > 2:444024/1‑175 AGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGG > 2:403236/1‑196 GCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTT > 1:745794/1‑236 ACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATAT < 1:444027/236‑1 TGTATTGCCTGAACTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGGAACCTTGCCATCCGCTGCGCGCCGGGTCAGCAGTACACCGCCATCGGGGCG > 2:308921/1‑159 CTGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGA < 1:821490/236‑1 TGGCCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGA < 1:507209/235‑1 CCTCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCG < 1:1001513/182‑1 TCTTCGGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGACATGA < 1:483822/235‑1 GGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGACATGAGTTGAT < 1:552665/236‑1 GGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCA < 1:403239/202‑1 CCCGCCCCGATGGCGGTGTACTGCTTACCCTGCGCGCAGCGGATGGCAAGGTTACCCGCCGGGTGCTGACCTACGGGCAATTGCACAGTGCCGAACAGCTGTCCTGGGCGATCAGTGCCATCCGTCGTGACCTGGCCGAAGAGGCCAGTGAATTGCCGGTCATCTCGATGCTGCAGAGCCAGCAGCGGTTTGCCTTGCCGACCTACCGCTGAGGGGTGTATTGCCTGAACTGGCCTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2058123‑2057883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actggcctcttcgGCCAGGTCACGACGGATGGCACTGATCGCCCAGGACAGCTGTTCGGCACTGTGCAATTGCCCGTAGGTCAGCACCCGGCGGGTAACCTTGCCATCCGCTGCGCGCAGGGTAAGCAGTACACCGCCATCGGGGCGGGCTTTGGTATTCACCTGATAGGCCGAAAATACCGATGCGAACTTTTGCTGGATGAGGTCCATATCAACTCCTGGCTGTTGTGTGGCAGACATGAGTTGAT > AE015451/2057988‑2058222 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |