| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2086080 | NA (NA) | 9 (0.160) | 9/328 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
| ? | AE015451 | = 2086138 | NA (NA) | coding (253/1302 nt) | PP_1865 | transposase | |||||
GCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2085841‑2086080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATG < AE015451/2086138‑2085912 GCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAG > 1:82742/1‑236GCTGATGCACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGTGCTTGAAGCCATCTCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAG > 1:275408/1‑236 ATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:531796/234‑1 ATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:905002/234‑1 ATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGATTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTG > 1:630397/1‑236 TACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:952950/231‑1 ACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTC > 2:499981/1‑226 CTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:1075845/229‑1 TTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTTCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAG > 1:567/1‑218 cCCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:329357/205‑1 CCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 1:179004/205‑1 CGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:401606/203‑1 GCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:466170/202‑1 TTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATC < 2:937561/221‑1 TTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCC < 2:508343/165‑1 TCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAG < 2:651073/213‑1 TCGAGGAGCACGGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGTCAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCT < 2:681250/196‑1 CGAGCTGCTGTTCTCGTCCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCGGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTG < 2:917008/147‑1 gcTCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCC < 2:148537/145‑1 GTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTC < 1:746478/104‑1 GTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTC > 2:746475/1‑104 GCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAG > 2:965967/1‑149 TCCCGTCAGCCTGTCACCAGAGCACGCAACACGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGG > 2:289629/1‑75 CAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATG < 1:1037011/234‑1 CAGCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGC < 1:608868/104‑1 GCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGC < 1:661392/226‑1 GCCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCA < 1:1084416/219‑1 CCTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGC < 1:445659/135‑1 CTGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTG > 2:979894/1‑193 aGTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGGTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAA < 2:899383/158‑1 GCTGATGTACTAGCGCGATTCGAGAAAAAAGCACCCGCCAGCGTAATGGCCAAACTTGCCTTGGAGCAGGCCATTGCGCCGGAGTGGGTCGATCAGGTTTTCGAGGAGCACCGCCAACGGCAGTATTCTCGCGAGCTGCTGTTCTCGACCATTATCAAGTTGATGTCGCTTGTTTCATTGGGCTTGAAGCCATCGCTGCATGCTGCGGCAAGACAACTGGACGACCTTCCCGTCAGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2085841‑2086080‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcctgTCACCAGAGCACGCAACAGGGCAGGTTCGGTTCGACTGATCTTGTCGTACAGAGCTGCCAGGCTGACGGGAAGGTCGTCCAGTTGTCTTGCCGCAGCATGCAGCGATGGCTTCAAGCCCAATGAAACAAGCGACATCAACTTGATAATGGTCGAGAACAGCAGCTCGCGAGAATACTGCCGTTGGCGGTGCTCCTCGAAAACCTGATCGACCCACTCCGGCGCAATG < AE015451/2086138‑2085912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |