| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2310856 = | 56 (0.970) | 3 (0.050) | 3/324 | NT | 5.4% | coding (607/1311 nt) | PP_2033 | conserved protein of unknown function |
| ? | AE015451 | 2311137 = | 52 (0.950) | coding (888/1311 nt) | PP_2033 | conserved protein of unknown function | |||||
CTTGCACAGCAACACCTGCTCCAGAAGGGTCTCCGGGTAACCACCCCCAATATTCGAGTGCACGCCCGGCAGCACGATGTCGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2311026‑2310856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaggccGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTTGT > AE015451/2311137‑2311243 CTTGCACAGCAACACCTGCTCCAGAAGGGTCTCCGGGTAACCATCCCCAATATTCGAGTGCACGCCCGGCAGCACGATGTTGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGTCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCC > 1:255565/1‑171CTTGCACAGCAACACCTGCTCCAGAAGGGTCTCCGGGTAACCACCCCCAATATTCGAGTGCACGCCCGGCAGCACGATGTCGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCCGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCA > 2:1042968/1‑225 CACCCCCAATATTCGAGTGCACGCCCGGCAGCACGATGTCGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCCGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTT < 1:1042971/235‑1 TATTCGAGTGCACGCCCGGCAGCACGATGTCGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCAC < 2:65916/114‑1 CTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCCGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGT > 2:257742/1‑129 CAGGCCGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTTGT < 1:523537/113‑1 CAGGCCGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTTGT > 2:523534/1‑113 AGGCCGCGCGTGATGACCGGGGAGGAGCCGGTTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTTGT < 2:63745/112‑1 CTTGCACAGCAACACCTGCTCCAGAAGGGTCTCCGGGTAACCACCCCCAATATTCGAGTGCACGCCCGGCAGCACGATGTCGTGGCCACTGCGCACCAGCGGGAAGTTATGCCGCCGCTCGTCCTCGGCCACCAGCTGCACCACGTGCCGGGCAATATCCGCACCCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2311026‑2310856‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccaggccGCGCGTGATGACCTGGGAGGAGCCGATTGCCGGTGGGCGGCGGGACGAGGCGCAAAAGCAGGTCTATGCGGCGGTGTACCGGGAGCGGCACGTGGCGGGGCACTTGT > AE015451/2311137‑2311243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |