New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2456238 =	60 (1.040)	3 (0.050)	3/324	NT	5.4%	coding (953/1464 nt)	gapB	glyceraldehyde‑3‑phosphate dehydrogenase
	?	AE015451	2456321 =	49 (0.900)					coding (1036/1464 nt)	gapB	glyceraldehyde‑3‑phosphate dehydrogenase

TTCAGGATGGCCATCGAAACGTTCGGCGTCGGGACACGAATGGCGTTGCCGGTCAGCTTGCCCTTCAGCACTGGCAGTGCCTTGGCAGCAGCGGTGGCGGCGCCGGTTTCGGTGATTACCATGTTCAGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2456457‑2456238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggccgtGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCACTGCCAGTGCTGAAGGGCAAGCTGACCGGCAACGCCATTCGTGTCCCGACGCCGAACGTTTCGATGGCCATCCTGAACCTGAACCTGGAAAAGGCCACCACCCGCGACGAGATCAACGAGTACCTGCGCCAGACCGCCATGCACTCGGAGCTGCACAAGCAGATCG  >  AE015451/2456321‑2456546                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCAGGATGGCCATCGAAACGTTCGGCGTCGGGACACGAATGGCGTTGCCGGTCAGCTTGCCCTTCAGCACTGGCAGTGCCTTGGCAGCAGCGGTGGCGGCGCCGGTTTCGGTGATTACCATGTTCAGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCC                                                                                                                                                                                                                                      >  1:641806/1‑218                    CGTTCGGCGTCGGGACACGAATGGCGTTGCCGGTCAGCTTGCCCTTCAGCACTGGCAGTGCCTTGGCAGCAGCGGTGGCGGCGCCGGTTTCGGTGATTACCATGTTCAGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGT                                                                                                                                                                                                                                    <  2:94014/201‑1                         GGCGTCGGGACACGAATGGCGTTGCCGGTCAGCTTGCCCTTCAGCACTGGCAGTGCCTTGGCAGCAGCGGTGGCGGCGCCGGTTTCGGTGATTACCATGTTCAGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACG                                                                                                                                                                                                                                           >  1:204861/1‑189                                                                            AGTGCCTTTGCAGCAGCGGTGGCGGCCCCGGTTTCGGTGATTACCATGTTCGGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGGGGCCGTGCCGCGCCAC                                                                                                                                                                                                                          <  1:504671/155‑1                                                                                                                                                    CGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTTTTGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCAC                                                                                                                                                                       >  2:1022996/1‑134                                                                                                                                                    CGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCAC                                                                                                                                                                       <  1:1022999/134‑1                                                                                                                                                                                                                    CGTGGCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCACTGCCAGTGCTGAAGGGCAAGCTGACCGGCAACGCCATTCGTGTCCCGACGCCGAACGTTTCGATGGCCATCCTGAACCTGAACCTGGAAAAGGCCACCACCCGCGACGAGATCAACGAGTACCTGCGCCAGACCGCCATGCACTCGGAGCTGCACAAGCAGATCG  <  1:749196/235‑1                                                                                                                                                                                                                        GCCGTGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCAATGCCAGTGCTGAAGGGCAAGCTGACCGGCAACGCCATTCGTGTCCCGACGCCGAACGTTTCGATGGCCATCCTGAACCTGAACCTGGAAAAGGCCACCACCCGCGACGAGATCAACGAGTACCTGCGCCAGACCGCCATGCACTCGGAGCTGCACAAGCAG      <  2:436859/227‑1                                                                                                                                                                                                                          CGTGCCGCGCCACTGACCATGGTAATCACCGAACCCGGCGCCGCCACCGCTGCTGCCAAGGCACTGCCAGTGCTGAAGGGCAAGCTGACCGGCAACGCCATTCGTGTCCCGACGCCGAACGTTTCGAT                                                                                                       <  1:705201/128‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCAGGATGGCCATCGAAACGTTCGGCGTCGGGACACGAATGGCGTTGCCGGTCAGCTTGCCCTTCAGCACTGGCAGTGCCTTGGCAGCAGCGGTGGCGGCGCCGGTTTCGGTGATTACCATGTTCAGTGGCGCGGCACGGCCACGGCGGCTGCCCTTGTGGAAGTTGTCGATCAGGTTCTGGTCGTTGGTGAACGAGTGAACGGTTTCGACGTGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2456457‑2456238 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtggccgtGCCGCGCCACTGAACATGGTAATCACCGAAACCGGCGCCGCCACCGCTGCTGCCAAGGCACTGCCAGTGCTGAAGGGCAAGCTGACCGGCAACGCCATTCGTGTCCCGACGCCGAACGTTTCGATGGCCATCCTGAACCTGAACCTGGAAAAGGCCACCACCCGCGACGAGATCAACGAGTACCTGCGCCAGACCGCCATGCACTCGGAGCTGCACAAGCAGATCG  >  AE015451/2456321‑2456546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.