| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 2487671 | 41 (0.710) | 3 (0.060) | 3/322 | NT | 6.6% | coding (43/516 nt) | PP_2182 | conserved protein of unknown function |
| ? | AE015451 | = 2487726 | 46 (0.850) | coding (98/516 nt) | PP_2182 | conserved protein of unknown function | |||||
CGTTTCCGTTACGCCAACCTGACCGACAAGCCCACACGCGTGCTTTGGGTGTTCAGCTGAGGGCCGTCGCACGGGCATGCGCGTTGTGCTTCGGCTAGCCGGGAAAGTTGGCCTGCAAGCAATGTGCAGGCTGCATGGGGTATCCTTGCACCACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2487446‑2487671‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgcgggGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAGCCGAAGCACAACGCGCATGCCCGTGCGACGGCCCTCAGCT < AE015451/2487726‑2487500 aGTTTCCGTTACGCCAACCTGACCGACAAGCCCACACGCGTGCTTTGGGTGTTCAGCTGAGGGCCGTCGCACGGGCATGCGCGTTGTGCTTCGGCTAGCCGGGAAAGTTGGCCTGCAAGCAATGTGCAGGCTGCATGGGGTATCCTTGCACCACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGCGGGGGCG < 1:177263/229‑1 tTTTCCGTTACGCCAACCTGACCGACAAGACCACACGCGTGCTTTGGGTGTTCAGCTGAGGGCCGTCGCGCGGGCATGCGCGTTGTGCTTCGGCTAGCCGGGAAAGTTGGCCTGCAAGCAATGTGCAGGCTGCATGGGGTATCCTTGCACCACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGC < 1:142541/221‑1 GGGTGTTCAGCTGAGGGCCGTCGCACGGGCATGCGCGTTGTGCTTCGGCTAGCCGGGAAAGTTGGCCTGCAAGCAATGTGCAGGCTGCATGGGGTATCCTTGCACCACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCG < 1:989164/235‑1 CACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTAAGCTACGAGACCGCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCA > 2:578188/1‑165 CGCCATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTt > 2:235707/1‑68 GAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGCAGTTGATTGCGTGGTGCCAGGATACCCCATGCATCCTGCACATTGCTTGCAGG > 1:140491/1‑230 ACCGCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGGGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCgc > 2:469686/1‑191 GCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAGCCGAAGCACAACGCGCATGCCCGTGCGACGGCCCTCAGCT < 1:127115/236‑1 GCCTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAGCCGAAGCACAACGCGCATGC > 1:1057180/1‑216 CTGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAGCCGAAGCACAACG > 1:176896/1‑207 TGCGGGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCCGCTA > 2:288103/1‑88 GGGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATT < 2:877797/127‑1 GGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAG < 2:748329/188‑1 CGTTTCCGTTACGCCAACCTGACCGACAAGCCCACACGCGTGCTTTGGGTGTTCAGCTGAGGGCCGTCGCACGGGCATGCGCGTTGTGCTTCGGCTAGCCGGGAAAGTTGGCCTGCAAGCAATGTGCAGGCTGCATGGGGTATCCTTGCACCACGCAATCAACTTCGAAGCAGTGAATGAACAATGGGTTTTGAACAACTAGCTGAGCTACGAGACCGCCTGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2487446‑2487671‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcctgcgggGGCGACTTGCGCTTGGGCGGTTTCGCGCTCTCGGCCTTTACCTGCCCTTTTTCCGCCCGCAGGCGGTCTCGTAGCTCAGCTAGTTGTTCAAAACCCATTGTTCATTCACTGCTTCGAAGTTGATTGCGTGGTGCAAGGATACCCCATGCAGCCTGCACATTGCTTGCAGGCCAACTTTCCCGGCTAGCCGAAGCACAACGCGCATGCCCGTGCGACGGCCCTCAGCT < AE015451/2487726‑2487500 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |