New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2616442	66 (1.140)	4 (0.070)	3/326	NT	6.0%	coding (609/1641 nt)	PP_2288	Phage tail fiber protein
	?	AE015451	= 2616471	62 (1.130)					coding (638/1641 nt)	PP_2288	Phage tail fiber protein

CTTCGCAGACCCTGTGGATGCGCAAGACCTGATGACGCTCAACTACATGAACGTCAACTTCAAGAACACCATGCTTGCGATTGAGCAGGACTCCATCGACAAGACCACTGCTATCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGACCTCAACACCATCACTCAGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2616217‑2616442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgccGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGGTCACTGTTGGCGGCTGTACGGATAGCAGTGGTCTTGTCGATGGAGTCCTGCTCAATCGCAAGCATGGTGTTCTTGAAGT  <  AE015451/2616471‑2616273                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTCGCAGACCCTGTGGATGCGCAAGACCTGATGACGCTCAACTACATGAACGTCAACTTCAAGAACACCATGCTTGCGATTGAGCAGGACTCCATCGACAAGACCACTGCTATCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGACCTCAACACCATCACTCAGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGG                                                                                                                                                                                                              >  1:127917/1‑221                        AAGACCTGATGACGCTCAACTACATGAACGTCAACTTCAAGAACACCATGCTTGCGATTGAGCAGGACTCCATCGACAAGACCACTGCTGTCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGACCGCAACACCATCACTGAGGCCGCAGCAGCCGCAACCTCAGCTTCCCAAACG                                                                                                                                                                                                               >  2:666115/1‑197                                                                                        GGACTCCATCGACAAGACCACTGCTATCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGACCTCAACACCCTCACTCAGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCCGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGC                                                                                                                                                                      <  2:731622/174‑1                                                                                                    ctAGACCACTGCTATCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGATCTCAACGCCATCACTCAGGCCGAAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCCGATTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGC                                                                                                                                                                      <  2:1027033/160‑1                                                                                                                                                                  TGAACGACCTCAACACCATCACTCAGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCCGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGGTCACTGTTGGCGGCTGTACGGATAGC                                                       >  1:1016710/1‑211                                                                                                                                                                                          AGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCCGAGCTCGCG                                                                                                                                                                                                >  2:93951/1‑50                                                                                                                                                                                                                           CGGCTGCCGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGGTCACTGTTGGCGGCTGTACGGATAGCAGTGGTCTTGTCGATGGAGTCCTGCTCAATCGCAAGC                  <  1:382732/191‑1                                                                                                                                                                                                                             GCTGCCGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGGTCACTGTTGGCGGCTGTACGGATAGCAGTGGTCTTGTCGATGGAGTCCTGCTCAATCGCAAGCATGGTGTTCTTGAAGT  <  1:185187/205‑1                                                                                                                                                                                                                                 gCGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGG                                                                                 <  2:107897/121‑1                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTCGCAGACCCTGTGGATGCGCAAGACCTGATGACGCTCAACTACATGAACGTCAACTTCAAGAACACCATGCTTGCGATTGAGCAGGACTCCATCGACAAGACCACTGCTATCCGTACAGCCGCCAACAGTGACCTGGAGGCGATTCACACGACTGCTGTGAACGACCTCAACACCATCACTCAGGCCGCAGAAGCCGCAACCTCAGCTTCCCAAACGGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2616217‑2616442 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggctgccGAGTTCGCGGCGTTGGTTTCGCTCGTTTTGGCAGCCGTTTGGGAAGCTGAGGTTGCGGCTTCTGCGGCCTGAGTGATGGTGTTGAGGTCGTTCACAGCAGTCGTGTGAATCGCCTCCAGGTCACTGTTGGCGGCTGTACGGATAGCAGTGGTCTTGTCGATGGAGTCCTGCTCAATCGCAAGCATGGTGTTCTTGAAGT  <  AE015451/2616471‑2616273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.