| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2641297 = | 48 (0.830) | 3 (0.060) | 3/306 | NT | 6.8% | coding (284/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase |
| ? | AE015451 | 2641315 = | 39 (0.760) | coding (266/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase | |||||
AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2641547‑2641297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcgcgtacgcgcggtTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCC > AE015451/2641315‑2641524 AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACC > 1:290194/1‑236 ACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCG < 1:958846/236‑1 AACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGT < 2:942848/223‑1 TGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTC < 1:665205/234‑1 CACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCACGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGGTGCTGAGCGAACCGC > 2:240449/1‑158 CAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCG < 2:900189/147‑1 TGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCACGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGAGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCATGTTCGCTGACCGC > 2:657562/1‑218 TACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTAGCAGCTGGCG > 2:40926/1‑83 AGCGAACCGCGCGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCC < 2:676119/233‑1 CGCGGGTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGTTGTCGGTATCCCAGGCCTTAGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTC < 2:387312/150‑1 GTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGCACAGGTGCGCGCC > 2:72678/1‑106 GTACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGC > 2:785186/1‑220 ACGCGCGGTTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGGTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGT > 2:97730/1‑161 AACAGCAGTTTCCACGACCAACAGGCCGCAATCGTCGAGCGCGCACTGGAGGCCGGCGTTACGCAAATGCTGCTGACAGGCACCAGCCTGGCGGTCAGCGAACAAGCGCTGGAGCTGTGCCAACAACTGGATGCCAGCGGCGCGCACCTGTTCGCCACGGCCGGCGTGCACCCTCATGATGCCAAGGCCTGGGATACCGACAGCGAGCGCCAGCTGCGACTGTTGCTGAGCGAACCGCGCGTACGCGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2641547‑2641297‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgcgcgtacgcgcggtTCGCTCAGCAACAGTCGCAGCTGGCGCTCGCTGTCGGTATCCCAGGCCTTGGCATCATGAGGGTGCACGCCGGCCGTGGCGAACAGGTGCGCGCCGCTGGCATCCAGTTGTTGGCACAGCTCCAGCGCTTGTTCGCTGACCGCCAGGCTGGTGCCTGTCAGCAGCATTTGCGTAACGCCGGCCTCCAGTGCGCGCTCGACGATTGCGGCC > AE015451/2641315‑2641524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |