New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 2752995 | 41 (0.710) | 4 (0.070) | 4/328 | NT | 9.1% | coding (552/1215 nt) | czcB‑II | cobalt‑zinc‑cadmium resistance protein |
? | AE015451 | = 2753007 | 41 (0.740) | coding (564/1215 nt) | czcB‑II | cobalt‑zinc‑cadmium resistance protein |
CGCACCGCACATGTGGTGCCCCGCGTGCCGGGTGTGGTCGAAGCGGTGCAAGCCGAGCTGGGCCAGGCGGTCAAGCGCGGCCAGGTACTGGCGGTGATTGCCAGCCAGCAGATCTCCGACCTGCGCAGTGAGCAGCAGGCCGCTCAACGTCGCCTGGAACTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2752762‑2752995 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagCGCCTGACGTGCCTGCAGGTAATCCTGCTCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGCGGCCTGCTGCTCACTGCGCAGGTCGGAGATCTGCTGGCTGGCAATCACCGCCAGTA < AE015451/2753007‑2752847 CGCACCGCACATGTGGTGCCCCGCGTGCCGGGTGTGGTCGAAGCGGTGCAAGCCGAGCTGGGCCAGGCGGTCAAGCGCGGCCAGGTACTGGCGGTGATTGCCAGCCAGCAGATCTCCGACCTGCGCAGTGAGCAGCAGGCCGCTCAACGTCGCCTGGAACTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAG > 2:410348/1‑234 CCGGGTGTGGTCGAAGCGGTGCAAGCCGAGCTGGGCCAGGCGGTCAAGCGCGGCCAGGTACTGGCGGTGATTGCCAGCCAGCAGATCTCCGACCTGCGCAGTGAGCAGCAGGCCGCTCAACGTCGCCTGGAACTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAGCGCCTGACGTGCCTGCAGGTAATCCT < 1:40397/233‑1 GCCTGGACCTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAGCGCCTGACGTGCCTGCAGGTAATCCTGCTCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGCGGCCTGCTGCTCACTGCGCAGGTCGGAGATCTGCTGGCTGGCAATCAC < 1:650607/236‑1 ACTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAGCGCCTGACGTGCCTGCAGGTAATCCTGCTCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGCGGCCTGCTGCTCACTGCGCAGGTCGGAGATCTGCTGGCTGGCg > 2:650604/1‑223 CTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAGCGCCTGACGTGCCTGCAGGTAATCCTGCTCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGCGGCCTGCTGCTCACTGCGCAGGTCGGAGATCTGCTGGCTGGCAATCACCGCCAGTA > 2:442287/1‑203 gcccgCCTGCAGCGCCTGACGTGCCTGCAGGGAATCCTGCGCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGGGGCCTGCTGCTCACT < 2:337743/127‑1 CGCACCGCACATGTGGTGCCCCGCGTGCCGGGTGTGGTCGAAGCGGTGCAAGCCGAGCTGGGCCAGGCGGTCAAGCGCGGCCAGGTACTGGCGGTGATTGCCAGCCAGCAGATCTCCGACCTGCGCAGTGAGCAGCAGGCCGCTCAACGTCGCCTGGAACTGGCGCGGTTGACCTTTCAACGGGAACAACAGCTGTGGCAGGAGCGAATCAGCGCCGAGCAGGATTACCTGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/2752762‑2752995 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcagCGCCTGACGTGCCTGCAGGTAATCCTGCTCGGCGCTGATTCGCTCCTGCCACAGCTGTTGTTCCCGTTGAAAGGTCAACCGCGCCAGTTCCAGGCGACGTTGAGCGGCCTGCTGCTCACTGCGCAGGTCGGAGATCTGCTGGCTGGCAATCACCGCCAGTA < AE015451/2753007‑2752847 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |