New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 301206858 (1.010)3 (0.050) 3/328 NT 5.0% coding (1129/1614 nt) bcsG putative endoglucanase
?AE015451 = 3012069 58 (1.050)coding (1130/1614 nt) bcsG putative endoglucanase

TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3011947‑3012068
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccgTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC  <  AE015451/3012069‑3011837
                                                                                                                                                                                                                                                                                                                                                                   
TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAG                                                                                                                                                                                           <  2:839714/170‑1
                    TGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACAC                                                                                                                                                                                <  2:585521/161‑1
                                                                           CTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGG                                                                            >  1:689991/1‑206
                                                                                                                      GCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGGGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGC                                                                                                      >  2:98541/1‑137
                                                                                                                         GTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC  <  2:377806/234‑1
                                                                                                                                                                                                                                                                                                                                                                   
TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3011947‑3012068
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccgTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC  <  AE015451/3012069‑3011837

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.