New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 3012068 | 58 (1.010) | 3 (0.050) | 3/328 | NT | 5.0% | coding (1129/1614 nt) | bcsG | putative endoglucanase |
? | AE015451 | = 3012069 | 58 (1.050) | coding (1130/1614 nt) | bcsG | putative endoglucanase |
TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3011947‑3012068 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccgTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC < AE015451/3012069‑3011837 TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAG < 2:839714/170‑1 TGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACAC < 2:585521/161‑1 CTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGG > 1:689991/1‑206 GCCGTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGGGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGC > 2:98541/1‑137 GTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC < 2:377806/234‑1 TGCCAGTGACCTGGATGTCTTGCGCCGTTGGTGGGGGCAACGCAAAGGCACCCCGGACGAACATGTGTCACTGTTCTACAACAGCATCAGCCTGCATGACGGCAACCGTATCGTCACCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3011947‑3012068 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgccgTCGGCGGTGACGATACGGTTGCCGTCATGCAGGCTGATGCTGTTGTAGAACAGTGACACATGTTCGTCCGGGGTGCCTTTGCGTTGCCCCCACCAACGGCGCAAGACATCCAGGTCACTGGCAATCGGCGAGCCGTCGAAGCCCACCAGTGCCCGTGGGAAGTCGGTATTGCGCATGCCCGGTTGCGGCATGCGCTGCTGGGTAATGTCGCCGATGAAGTTGTCGAACCGGCC < AE015451/3012069‑3011837 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |