New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3021021 =	54 (0.940)	5 (0.090)	5/324	NT	8.8%	coding (1559/3519 nt)	PP_2638	putative Cellulose synthase operon C protein
	?	AE015451	3021040 =	52 (0.950)					coding (1578/3519 nt)	PP_2638	putative Cellulose synthase operon C protein

TACGCCGCTGAACACGCTGTTCCAGCGCGTGCATGTCCGCGCTCCAGGTCGCCTGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3021185‑3021021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccagccACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCGCGTGGTGAA  >  AE015451/3021040‑3021274                                                                                                                                                                                                                                                                                                                                                                                                                  TACGCCGCGGAACACGCTGTCCCAGCGCGTGCATGTCCGCGCTCCAGGTCGCCTGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTG                                                                                                                                                                                                                                        <  1:765864/170‑1  ACGCCGCTGAACACGCTGTTCCAGCGCGTGCATGTCCGCGCTCCAGGTCGCCTGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGA                                                                                                                                                                                          >  1:724484/1‑215             CACGCTGTTCCAGCGCGTGCATGTCCGCGCTCCAGGTCGCCTGAGGTCCCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTGATCCGG                                                                                                                                                                                                                                  <  1:331813/164‑1                                  TGTCCGCGCTCCAGGTCGCCTGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCC                                                                                                                                                                                                       <  2:724481/170‑1                                                      TGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGC                                                                                                                                                                                                                                              >  1:992893/1‑111                                                      TGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGC                                                                                                                                                                                                                                              <  2:992890/111‑1                                                          GTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGCCAA                                                                                                                                                                                                                  <  1:1087257/135‑1                                                                                   CAAGGCATCACGGTCGCTGGACTCCCGGAACGGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCCACGTGATCCGGCAACGCGCTATGC                                                                                                                                                                                                                     <  2:993817/107‑1                                                                                                                                                               ACCAGCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCT                                                                             <  1:684192/167‑1                                                                                                                                                                 CAGCCACGGGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTT                                                                                                     <  2:106473/141‑1                                                                                                                                                                  atCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCGCGTG       <  1:483174/232‑1                                                                                                                                                                   GCCACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCGCGTGGTG    <  1:157116/236‑1                                                                                                                                                                     CACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCGCGTGGTGAA  >  1:728160/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                  TACGCCGCTGAACACGCTGTTCCAGCGCGTGCATGTCCGCGCTCCAGGTCGCCTGAGGTACCGCCCTCAGACTTTCCAGAGCCAAGGCATCACGGTCGCTGGACTCCAGGAACAGGCCGTTGGCATAGCGCGTTGCCGGATCACGTGGCTGGTGCTGCACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/3021185‑3021021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccagccACGTGATCCGGCAACGCGCTATGCCAACGGCCTGTTCCTGGAGTCCAGCGACCGTGATGCCTTGGCTCTGGAAAGTCTGAGGGCGGTACCTCAGGCGACCTGGAGCGCGGACATGCACGCGCTGGAACAGCGTGTTCAGCGGCGTATGACCCTGGCCTCTGCGCAGCAGTTGCAGGCACAAGGCCGCAGTGCCGAGGCGACAGCCTTGCTTGAAGCCGGCCTGGCGCGTGGTGAA  >  AE015451/3021040‑3021274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.