New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3126450	54 (0.940)	3 (0.050)	3/328	NT	5.5%	intergenic (‑181/+15)	PP_2743/PP_2744	Acetyltransferase, GNAT family/Ribose‑phosphate pyrophosphokinase family protein
	?	AE015451	= 3126455	52 (0.940)					intergenic (‑186/+10)	PP_2743/PP_2744	Acetyltransferase, GNAT family/Ribose‑phosphate pyrophosphokinase family protein

GCGCGCAATATCATGCGCGTCCGAGACTCGAGCGGGTCTGAAGTCGATAGGCATGCACAGTGCTCCCATGGTGCCGGGGTCAGTTTTCAAGGGTTACGCCTTTGGCTGGGGGCAGGGTAGACGGTTATAGCTGTTCCCATGATGCTCTGCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3126216‑3126450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcAGGTGGCGCCGGCGGAGTGTCCCTGCTCCTGAAATCGTCGGGCCATTTGGCCATGAGGGCCGTGTCGCACACCATGCTGATGGTGTTCGCGCAGAGCATCATGGGAACAGCTATAACCGTCTACCCTGCCCCCAGCCAAAGGCGTAACCCTTGAAAACTGACCCCGGCACCATGGGAGCACTGTGCATGCCTATCGACTTCAGACCC  <  AE015451/3126455‑3126249                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGCGCAATATCATGCGCGTCCGAGACTCGAGCGGGTCTGAAGTCGATAGGCATGCACAGTGCTCCCATGGTGCCGGGGTCAGTTTTCAAGGGTTACGCCTTTGGCTGGGGGCAGGGTAGACGGTTATAGCTGTTCCCATGATGCTCTGCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCC                                                                                                                                                                                                                      >  1:948132/1‑230                             CGAGCGGGTCTGAAGTCGATAGGCATGCACAGTGCTCCCATGGTGCCGGGGTCAGTTTTCAAGGGTTACGCCTTTGGCTGGGGGCAGGGTAGACGGTTATAGCTGTTCCCATGATGCTCTGCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGC                                                                                                                                                                                                                 <  2:983357/207‑1                                                                                                 CGCCTTTGGCTGGGGGCAGGGTAGACGGTTATAGCTGTTCCCATGATGCTCTGCGCGAACACCATCAGCATGGGGGGCGACACGGCCCTCATGGCCAAGTGGCCCGACGATTTCAGGAGCAGGGCCACTCCGCCGGCG                                                                                                                                                                                                                  >  2:265835/1‑138                                                                                                                                                                                       CCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCAGGTGGCGCCGGCGGAGTGTCCCTGCTCCTGAAATCGTCGGGCCATTTGGCCATCACGGCCG‑GTCGCACAACATGCTGATGGTGTTCGCGCA                                                                                                                    >  2:946892/1‑145                                                                                                                                                                                              GCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGCAGGTGGCGCCGGCGGAGTGTCCCTGCTCCTGAAATCGTCGGGCCATTTGGCCATGAGGGCCGTGTCGCACACCATGCTGATGGTGTTCGC                                                                                                                       >  2:615416/1‑136                                                                                                                                                                                                                 TCAGGAGCAGGGACACTCCCCCGGCGCAGGTGGCGCCGGCGGAGTGTCCCTGCTCCTGAAATCGTCGGGCCATTTGGCCATGAGGGCCGTGTCGCACACCATGCTGATGGTGTTCGCGCAGAGCATCATGGGAACAGCTATAACCGTCTACCCTGCCCCCAGCCAAAGGCGTAACCCTTGAAAACTGACCCCGGCACCATGGGAGCACTGTGCATGCCTATCGACTTCAGACCC  <  2:1042741/234‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCGCGCAATATCATGCGCGTCCGAGACTCGAGCGGGTCTGAAGTCGATAGGCATGCACAGTGCTCCCATGGTGCCGGGGTCAGTTTTCAAGGGTTACGCCTTTGGCTGGGGGCAGGGTAGACGGTTATAGCTGTTCCCATGATGCTCTGCGCGAACACCATCAGCATGGTGTGCGACACGGCCCTCATGGCCAAATGGCCCGACGATTTCAGGAGCAGGGACACTCCGCCGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3126216‑3126450 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggcgcAGGTGGCGCCGGCGGAGTGTCCCTGCTCCTGAAATCGTCGGGCCATTTGGCCATGAGGGCCGTGTCGCACACCATGCTGATGGTGTTCGCGCAGAGCATCATGGGAACAGCTATAACCGTCTACCCTGCCCCCAGCCAAAGGCGTAACCCTTGAAAACTGACCCCGGCACCATGGGAGCACTGTGCATGCCTATCGACTTCAGACCC  <  AE015451/3126455‑3126249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.