| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 3661518 | 53 (0.920) | 3 (0.060) | 3/314 | NT | 6.1% | coding (177/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | AE015451 | = 3661504 | 43 (0.810) | coding (191/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
ACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3661290‑3661518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacccgggtggcCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCT < AE015451/3661504‑3661279 ACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGTAGACACCAGTTGCACCCACTTCAGGCCCCAGGG > 1:303750/1‑216 AACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGAAGAAGTCGAGGCCCGAAGACACCAGTTGCACCCCCTTCAGGCCCCAGGGCCACgc > 1:106852/1‑216 AGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGC > 1:1083080/1‑159 TTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTG < 1:19122/167‑1 CTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAGCACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCG < 1:1018525/175‑1 CGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGCCCTGGTGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGC < 2:1028412/157‑1 CCTGGAACACCCAGTCGGGGTAGAAGACGATGCCCGAAGACACCAGGTGCACCCACTTCAGGCCCCAGGGCCACCCGGGCGGCCCTGGGGCCTGAAGTGGGGGCAACTGGTGTCTTCG > 1:635830/1‑118 ACCCGGGTGGCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGCGTTCGCCGCCGCCAAGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCC < 2:687251/217‑1 CCCGGGTGGCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCT > 1:663406/1‑236 TGGCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACT > 1:719145/1‑161 TGGCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACT < 2:719142/161‑1 GCCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACT > 2:1083077/1‑159 CCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGC < 2:948344/39‑1 ACGCAACGGGGCCAGCGGGGTCAGGCGCCAGTCGGCGTCCTTGACCCATAGACCGGGCAGTTGCTTGGCGGCGGCGAACACCAAAGCCAGGGCAAACTCGGCCACTTGTTCGGCGTTGGCGCCTTTGCCGCTGGTTACCGTCGCCCCCTGGAACACCCAGTCGGGGTAGAAGTCGATGCCCGAAGACACCAGTTGCACCCACTTCAGGCCCCAGGGCCACCCGGGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3661290‑3661518‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacccgggtggcCCTGGGGCCTGAAGTGGGTGCAACTGGTGTCTTCGGGCATCGACTTCTACCCCGACTGGGTGTTCCAGGGGGCGACGGTAACCAGCGGCAAAGGCGCCAACGCCGAACAAGTGGCCGAGTTTGCCCTGGCTTTGGTGTTCGCCGCCGCCAAGCAACTGCCCGGTCTATGGGTCAAGGACGCCGACTGGCGCCTGACCCCGCTGGCCCCGTTGCGTGGTCGCACCCT < AE015451/3661504‑3661279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |