New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4053475	49 (0.850)	3 (0.050)	3/326	NT	5.9%	coding (49/1320 nt)	PP_3573	putative Monooxygenase
	?	AE015451	= 4053476	49 (0.890)					coding (50/1320 nt)	PP_3573	putative Monooxygenase

CGCTCGAAAAACCACGCCACCCACCCGGCCAACCTGCCCCACAGGCCAGAAAACTCAAGGCCTTCGCCGTTTTATCGGCAAGTACCAGCTAAATACTATTTTCGCCATTTCCACGGCATCCCTAGTCTGGCTCCAGGCAACGGCGGTCCTCCAAACCGACCTGACAAAAACCGCCTGAACAAGGGCTCGGACATGACACTGAACAACCTCGAAATCGACACCCTCGTCGTCGGCGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4053235‑4053475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggccTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAAATAGTATTTAGCTGGTACTTGCCGATAAAACGGCGAAGGCCTTGAGTTTTCTGGCCTGTGG  <  AE015451/4053476‑4053273                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGCTCGAAAAACCACGCCACCCACCCGGCCAACCTGCCCCACAGGCCAGAAAACTCAAGGCCTTCGCCGTTTTATCGGCAAGTACCAGCTAAATACTATTTTCGCCATTTCCACGGCATCCCTAGTCTGGCTCCAGGCAACGGCGGTCCTCCAAACCGCCCTGACAAAAACCGCCTGAACAAGGGCTCGGACATGACACTGAACAACCTCGAAATCGACACCCTCGTCGTCGGCGC                                                                                                                                                                                                                   >  1:205815/1‑236      GAAAAACCACGCCACCCACCCGGCCAACCTGCCGCACAGGCCAGAAAACTCAAGGCCTTCGCCGTTTTATCGGCAAGTACCAGCTAAATAGTATTTTCGCCATTTCCACGGCATCCCTAGTCTGGCTCCAGGCAACGGCGGTCCTCCAAACCGACCTGACAAAAACCGCCTGAACAAGGGCTCGGACATGACACTGAACAACCTCGAAATCGACACCCTCGTCGTCGGCGCCG                                                                                                                                                                                                                 >  2:568367/1‑233                                                                                                                                                                  TGACAAAAACCGCCTGAACAAGGGCTCGGACATGACACTGAACAACCTCGAAATCGACACCCTCGTCGTCGGCGCCGGCCTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTG                                                                                                                   >  1:1081671/1‑171                                                                                                                                                                                                              ACCTCGAAATCGACACCCTCGTCGTCGGCGCCGGCCTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAG                                                                                                                            >  1:918905/1‑118                                                                                                                                                                                                                  CGAAATCGACACCCTCGTCGTCGGCGCCGGCCTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAAATAGTATTTAGCTGGTACTTGCCGATAAAACGGCGAAGGCCTTGAGTGTTCTGGCCTGTGG  >  1:491422/1‑236                                                                                                                                                                                                                                             CGGCCTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAAATAGTATTTAGCTGGTACTTGCCGATAAAACG                               <  2:475922/180‑1                                                                                                                                                                                                                                              GGCCTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAACTAGTATTTAGCTGGTACTTGCCGAT                                     >  1:657732/1‑173                                                                                                                                                                                                                                                 CTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTATTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAAATAGTATTTAGCTGGTACTTGCCGATAAAACGG                              <  2:549940/177‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGCTCGAAAAACCACGCCACCCACCCGGCCAACCTGCCCCACAGGCCAGAAAACTCAAGGCCTTCGCCGTTTTATCGGCAAGTACCAGCTAAATACTATTTTCGCCATTTCCACGGCATCCCTAGTCTGGCTCCAGGCAACGGCGGTCCTCCAAACCGACCTGACAAAAACCGCCTGAACAAGGGCTCGGACATGACACTGAACAACCTCGAAATCGACACCCTCGTCGTCGGCGCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/4053235‑4053475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccggccTGGCCGGCGCCGACGACGAGGGTGTCGATTTCGAGGTTGTTCAGTGTCATGTCCGAGCCCTTGTTCAGGCGGTTTTTGTCAGGTCGGTTTGGAGGACCGCCGTTGCCTGGAGCCAGACTAGGGATGCCGTGGAAATGGCGAAAATAGTATTTAGCTGGTACTTGCCGATAAAACGGCGAAGGCCTTGAGTTTTCTGGCCTGTGG  <  AE015451/4053476‑4053273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.