New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4371608 =	59 (1.020)	17 (0.480)	15/208	NT	30.9%	intergenic (‑193/‑1379)	PP_5636/PP_3849	protein of unknown function/putative calcium‑binding protein, hemolysin‑type
	?	AE015451	= 4427498	40 (1.140)					intergenic (+82/+20)	PP_3920/PP_t61	putative Phage integrase/tRNA‑Cys

CCTAGGAGCTGACGACTCCGAGTGAGGTGCTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4371904‑4371608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggattgcaaatccgtctacgccggttcgattccgacctcggcctccaccattcgaaagccccgcagCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATGTCGCGGAACTGGAATTGAGCGA  <  AE015451/4427498‑4427265                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCTAGGAGCTGACGACTCCGAGTGAGGTGCTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATT                                                                                                                                                                                                                                                                                                         >  1:828078/1‑236          TGACGACTCCGAGTGAGGTGCTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCA                                                                                                                                                                                                                                                                                                      <  2:379103/230‑1               ACTCCGAGTGAGGTGCTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTC                                                                                                                                                                                                                                                                                              >  1:857348/1‑233                              CTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCG                                                                                                                                                                                                                                                                            <  1:408613/236‑1                                 AGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCG                                                                                                                                                                                                                                                                            <  2:690877/233‑1                                     CGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGGCCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTA                                                                                                                                                                                                                                                                                            <  1:225165/213‑1                                         TGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTC                                                                                                                                                                                                                                                                 >  1:540509/1‑236                                         TGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCAACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTC                                                                                                                                                                                                                                                                 >  1:897069/1‑236                                           TGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCGTGAGGCGGCGATTCTTGTATCGGATTGC                                                                                                                                                                                                                                                                                                       >  2:691411/1‑196                                             GCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTA                                                                                                                                                                                                                                                                                            <  1:985836/205‑1                                                CAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACC                                                                                                                                                                                                                                                             >  2:595206/1‑233                                                CAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCAGACCTCGGCCTCCACC                                                                                                                                                                                                                                                             >  2:364928/1‑233                                                      GAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCC                                                                                                                                                                                                                                                                                        <  1:1070077/200‑1                                                       AGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAA                                                                                                                                                                                                                                                     <  2:948985/234‑1                                                        GAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCG‑AAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCC                                                                                                                                                                                                                                                 >  1:66733/1‑236                                                         atTCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGTGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTTTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGA                                                                                                                                                                                                                                                                           <  1:56739/208‑1                                                          ATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGC                                                                                                                                                                                                                                                                                                       <  2:894976/181‑1                                                                             CTGCAGTACGGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCC                                                                                                                                                                                                                                                  <  2:831531/215‑1                                                                               GCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGAT                                                                                                                                                                                                                                                                                <  1:42344/183‑1                                                                                     CTGGAAGGTGGGCACAAAAGGCCCGAAATTCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATT                                                                                                                                                                                                                                                                                                         >  2:1055561/1‑152                                                                                     CTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCC                                                                                                                                                                                                                                                 <  2:779639/208‑1                                                                                     CTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCC                                                                                                                                                                                                                                                 >  1:779642/1‑208                                                                                                GCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCA                                                                                                                                                                                                           >  1:862222/1‑235                                                                                                GCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGG                                                                                                                                                                                                                                   <  2:865527/211‑1                                                                                                GCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGG                                                                                                                                                                                                                                   >  1:865530/1‑211                                                                                                GCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCG                                                                                                                                                                                                                                               >  1:97110/1‑199                                                                                                                AATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCG                                                                                                                                                                                                                                                                            <  1:1078253/154‑1                                                                                                                                 TTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAG                                                                                                                                                                            <  2:540506/233‑1                                                                                                                                        GACCCTTGTATAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAG                                                                                                                                                                       <  1:17541/231‑1                                                                                                                                              TGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGGTTCTTGTATCGGAGTGCCAATCCGTCTACGC                                                                                                                                                                                                                                                                                         >  2:130858/1‑111                                                                                                                                                      GCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGATTCCGGCAAGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTA                                                                                                                                                                                                                                                                                            <  1:241390/100‑1                                                                                                                                                        GGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCCTTCGA                                                                                                                                                                                                                                                       >  2:191345/1‑135                                                                                                                                                          GTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGA                                                                                                                                                 >  2:908008/1‑235                                                                                                                                                          GTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCC                                                                                                                                                                                                                                                >  1:240030/1‑140                                                                                                                                                           TTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGG                                                                                                                                                                                                                            >  2:11815/1‑159                                                                                                                                                                 GCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGA                                                                                                                                                                                                                                                                           <  1:705949/106‑1                                                                                                                                                                       AAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAG                                                                                                                                               >  2:381006/1‑224                                                                                                                                                                        atTCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAAGCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAAC                                                                                                                                                              <  2:305614/206‑1                                                                                                                                                                         ATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAG                                                                                                                                                                                                                                                    >  2:419689/1‑121                                                                                                                                                                          TCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGG                                                                                                                                         <  2:807940/227‑1                                                                                                                                                                                                          CGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGT                                                                                                                                                                                            <  2:765438/144‑1                                                                                                                                                                                                           GGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGA                                                                                                                                                                                                                                                                           >  1:593729/1‑64                                                                                                                                                                                                           GGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGA                                                                                                                                                                                                                                                                           <  2:593726/64‑1                                                                                                                                                                                                            GCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCC                                                                                                                                >  1:101429/1‑202                                                                                                                                                                                                            GCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCCGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAACCACCGAAGTCCCAAAACTACTTGCGACCAGTCCCc                                                                                                                                                                  >  2:241579/1‑167                                                                                                                                                                                                                GCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCAGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTT                                                                                          <  1:364931/236‑1                                                                                                                                                                                                                       GCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTT                                                                                               <  2:431032/224‑1                                                                                                                                                                                                                            GATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCTATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAG                                                                               <  1:611241/235‑1                                                                                                                                                                                                                              TTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCA                                                                             >  1:975889/1‑235                                                                                                                                                                                                                                       CGGATTGCAATTCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTG                                                                                     <  2:357587/218‑1                                                                                                                                                                                                                                        GGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGA                                                                                                     <  1:447225/201‑1                                                                                                                                                                                                                                          ATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGGGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATC                                                                <  1:552052/236‑1                                                                                                                                                                                                                                           TTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCG                                                               >  1:973811/1‑236                                                                                                                                                                                                                                           TTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATC                                                                <  1:947251/235‑1                                                                                                                                                                                                                                           TTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTT                                                                                                                                                    >  1:526481/1‑151                                                                                                                                                                                                                                           TTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTT                                                                                                                                                    <  2:526478/151‑1                                                                                                                                                                                                                                            TGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCACCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCCGCACGCTTGCATCGC                                                              >  2:75684/1‑236                                                                                                                                                                                                                                             GCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATC                                                                <  2:828075/233‑1                                                                                                                                                                                                                                                         cCGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGT                                                                                                                                                                                                                                  >  2:68856/2‑59                                                                                                                                                                                                                                                         ACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGA                                                  >  1:506320/1‑235                                                                                                                                                                                                                                                         ACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAG                                                                               <  2:437056/206‑1                                                                                                                                                                                                                                                         ACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCA                                                                                                                                                                                                           >  1:67978/1‑82                                                                                                                                                                                                                                                         ACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCA                                                                                                                                                                                                           <  2:67976/82‑1                                                                                                                                                                                                                                                                   GATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCC                                                                                                                                                                    >  2:510868/1‑111                                                                                                                                                                                                                                                                   GATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCC                                                                                                                                                                    <  1:510871/111‑1                                                                                                                                                                                                                                                                      TCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAA                                                                                                                  <  2:770060/158‑1                                                                                                                                                                                                                                                                               GGCCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCT                                   <  2:156385/228‑1                                                                                                                                                                                                                                                                                 CCTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACG                                                                        >  2:236823/1‑189                                                                                                                                                                                                                                                                                  CTCCACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACAAGTCCCAAAACTCCTTATTTTGGAGGGCTTGGCGATGGCC                                                                                                                                 >  1:390694/1‑131                                                                                                                                                                                                                                                                                     CACCATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATG                        <  2:551047/233‑1                                                                                                                                                                                                                                                                                        CATTCGAAAGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATGTCGCGG                  <  1:143949/236‑1                                                                                                                                                                                                                                                                                               ctGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTTATTCCTTCTTTTGAGTGGCCCAGCTGAACGCTTGCAT                                                                 <  2:596892/180‑1                                                                                                                                                                                                                                                                                                AGCCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTC                                                            <  1:495019/186‑1                                                                                                                                                                                                                                                                                                  CCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACc                                                                        >  2:112545/1‑171                                                                                                                                                                                                                                                                                                  CCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATGTCGCGGAACTGGAATT        >  1:298147/1‑236                                                                                                                                                                                                                                                                                                  CCCCGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGCCGTTGATCTCCGATGCCGCCTTCGGTCG                            >  1:238250/1‑216                                                                                                                                                                                                                                                                                                     CGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGCTCGGATGCCGCGGGACTGGAATTGAG     >  1:202884/1‑236                                                                                                                                                                                                                                                                                                     CGCAGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACG                                                                                                               <  2:34794/130‑1                                                                                                                                                                                                                                                                                                        AGCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATGTCGCGGAACTGGGATTGAGCGA  >  1:91556/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCTAGGAGCTGACGACTCCGAGTGAGGTGCTCAGGCCGGCTGTGGCGCAGCCCGAGAATCCATTTTCACGCTACTGCTGCAGTACTGGAAGGTGGGCAAAAAAGGCCCGAAAATCAGTTCCAAAACTTTTTAATCGACCCTTGTAGAATGCGGGTTACAGGCGTGTAAATCCCGCTTCGTTTTGGAACTGATTATTGCTTCCGGCAGGCATGAGGCGGCGATTCTTGTATCGGATTGCAAATCCGTCTACGCCGGTTCGATTCCGACCTCGGCCTCCACCATTCGAAAGCCCCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4371904‑4371608 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggattgcaaatccgtctacgccggttcgattccgacctcggcctccaccattcgaaagccccgcagCCATTGAGGTTGCGGGGTTTTTCTTTGCGCGCAGGAAAACACCGAAGTCCCAAAACTAATTGAGACCAGTCCCAAAACTTCATCATTTGGAAGGCTTGGCGATGGCCCCGACGCGTCGGTAAACGCGCTCCGTGATTCCTTCTTTTGAGTGGCCCAGCAGAACGCTTGCATCGCTCAGGTCGTTGATCTCCGAGGCCGCCTTCGGTCGGATGTCGCGGAACTGGAATTGAGCGA  <  AE015451/4427498‑4427265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.