New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 4791764 | 40 (0.690) | 3 (0.060) | 3/316 | NT | 7.6% | coding (2076/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
? | AE015451 | = 4791873 | 36 (0.680) | coding (1967/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
CAGCAGTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4791527‑4791764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtatgcccaaggGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCTGGAACACTTCGCCATGGTCTCCACGCCTGCCGCCGACCTTGGGCATACCATGCTGTTTGGCGCGCTCTGGGCCGGCAAGACGGTACATCTGCTGCAGCGCGAGGCGGTGCTCGATGCCGACGGTTTCGCCGCCTACCTGTCGGCAAACCACGT < AE015451/4791873‑4791648 CAGCAGTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAA > 1:697563/1‑236 CTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGG < 1:613944/236‑1 GCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCTGGAACACTTCGCCATGGTCTCCACG < 1:469285/235‑1 ACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGC < 2:235874/158‑1 gggagGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCGGGAACACTTCGCCATGGTCTCCACGCCTGCCGCCGACCTTGGGCATACCATGCTGTTTGGCGCGCTCTGGGCCGGCAA < 2:264146/159‑1 GGTATGCCCAAGGGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCTGGAACACTTCGCCATGGTCTCCACGCCTGCCGCCGACCTTGGGCATACCATGCTGTTTGGCGCGCTCTGGGCCGGCAAGACGGTACATCTGCTGCAGCGCGAGGCGGTGCTCGATGCCGACGGTTTCGCCGCCTACCTGTCGGCAAAC > 2:828780/1‑234 GGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCTGGAACACTTCGCCATGGTCTCCACGCCTGCCGCCGACCTTGGGCATACCATGCTGTGTGGCGCGCTCTGGGCCGGCAAGACGGTACATCTGCTGCAGCGCGAGGCGGTGCTCGATGCCGACGGTTTCGCCGCCTACCTGTCGGCGAACCACGT > 1:291677/1‑227 CAGCAGTGCCGGCGGGCAGGCCTCGCCGCCAAGCACCAGGCAACGCTGCGGCAGCACGCTGGCATCGGCGCAGGCATCGAGCAGCGCACCCAGGTGCGAAGGCACGATTTTCAGCGCATCGACGTGGTTTGCCGACAGGTAGGCGGCGAAACCGTCGGCATCGAGCACCGCCTCGCGCTGCAGCAGATGTACCGTCTTGCCGGCCCAGAGCGCGCCAAACAGCATGGTATGCCCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/4791527‑4791764 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtatgcccaaggGGGTCGCGGTGTCTCATGGGGCGCTGGCCAATTACCTTGAAGGCTTGTCCGAGCGGATTGCCCTTGGCGATCTGGAACACTTCGCCATGGTCTCCACGCCTGCCGCCGACCTTGGGCATACCATGCTGTTTGGCGCGCTCTGGGCCGGCAAGACGGTACATCTGCTGCAGCGCGAGGCGGTGCTCGATGCCGACGGTTTCGCCGCCTACCTGTCGGCAAACCACGT < AE015451/4791873‑4791648 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |