New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5496889 =	75 (1.300)	3 (0.050)	3/332	NT	3.9%	intergenic (‑205/‑39)	cobG/cobL	putative precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase
	?	AE015451	5496907 =	75 (1.340)					intergenic (‑223/‑21)	cobG/cobL	putative precorrin‑3B synthase/precorrin‑6Y C(5,15)‑methyltransferase
Rejected: Frequency below/above cutoff threshold.

GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAAGCCGTCTTCGCCGATGCCTACTACTGTCAGCCAGGGTGTCATGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5497125‑5496889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGTCTTCGGCAGCCCGCGCCAGCTGGCCTTGCTGCCACGTTGCGTGACCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCG  >  AE015451/5496907‑5497126                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAAGCCGTCTTCGCCGATGCCTACTACTGTCAGCCAGGGTGTCATGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCC                                                                                                                                                                                                                               >  1:692562/1‑236                                                                                                                                                                                                    CATGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGTCTTCGGCAGCCCGCGCCAGCTGGCCGTGCTGCCACGTGGC                                                                  >  1:272920/1‑198                                                                                                                                                                                                      TGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGC                                                                                                                                 >  1:625489/1‑133                                                                                                                                                                                                      TGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGC                                                                                                                                 <  2:625486/133‑1                                                                                                                                                                                                                                          CCCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGTCTTCGGCAGCCCGCGCCAGCTGGCCTTGCTGCCACGTTGCGTGACCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTG            >  2:756712/1‑214                                                                                                                                                                                                                                           CCCAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGT                                                                                                          >  2:53690/1‑119                                                                                                                                                                                                                                             CAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGTCTTCGGCAGCCCGCGCCAGCTGGCCTTGCTGCCACGTTGCGTGACCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCG  >  2:593754/1‑221                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGAAGGGCCAGCACTGGGGCCAGCGAGAACGGGCTGGGCCAGGCCAACTGTTCAGCGGTCACGCAACGTGGCAGCAAGGCCAGCTGGCGCGGGCTGCCGAAGACCCGGCCAGCGCCCAGCAGGGCGCGCCGGGCCTGTTTGCCCAGGCCGCTGAAGCCGTCTTCGCCGATGCCTACTACTGTCAGCCAGGGTGTCATGTATTTCAATCCGCCATTTTTGGGGCCGCTTCGCGCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5497125‑5496889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccccAAAAATGGCGGATTGAAATACATGACACCCTGGCTGACAGTAGTAGGCATCGGCGAAGACGGCTTCAGCGGCCTGGGCAAACAGGCCCGGCGCGCCCTGCTGGGCGCTGGCCGGGTCTTCGGCAGCCCGCGCCAGCTGGCCTTGCTGCCACGTTGCGTGACCGCTGAACAGTTGGCCTGGCCCAGCCCGTTCTCGCTGGCCCCAGTGCTGGCCCTTCGCG  >  AE015451/5496907‑5497126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.