| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5728252 = | 55 (0.950) | 3 (0.050) | 3/326 | NT | 5.7% | coding (386/1680 nt) | opgG | Glucans biosynthesis protein G |
| ? | AE015451 | 5728289 = | 47 (0.860) | coding (349/1680 nt) | opgG | Glucans biosynthesis protein G | |||||
AGTTCGCGGACTACCAGAAAATCCGTTTCCTGCAGGAAAAGGCCGAGTGGGCCAAGGACAAGACCCCGTTCAAGCTGTCGTTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5728489‑5728252‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttccgGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCATGCCCTGATGATAGAACGACAGCTTGAACGGGGTCTTGTCCTTGGCCCACTCGGCCTTTTCCTGCAGGAAACGGATTTTCTGGTAGTCCGCGAACTTCATGTCGCGGAACACGGCCGGCAGG > AE015451/5728289‑5728515 AGTTCGCGGACTACCAGAAAATCCGTTTCCTGCAGGAAAAGGCCGAGTGGGCCAAGGACAAGACCCCGTTCAAGCTGTCGTTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTTC < 1:511926/236‑1AGTTCGCGGACTACCAGAAAATCCGTTTCCTGCAGGAAAAGGCCGAGTGGGCCAAGGACAAGACCCCGTTCAAGCTGTCGTTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTT < 1:1032298/235‑1 GAGTGGGCCAAGGACAAGACCCCGTTCAAGCTGTCGTTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAAGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTT < 1:411215/191‑1 TTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGct > 2:1049553/1‑151 CACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTT > 1:686082/1‑128 CACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTT < 2:686079/128‑1 CGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTTCCGGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCAT > 1:413853/1‑163 CGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTTCCGGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCAT < 2:413850/163‑1 AAAAACCTCGGTTATGCCGGTTTCCGGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCATGCCCTGATGATAGAACGA > 2:243114/1‑150 GGTTTCCGGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCATGCCCTGATGATAGAACGACAGCTTGAACGGGGTCTTGTCCTTGGCCCACTCGGCCTTTTCCTGCAGGAAACGGATTTTCTGGTAGTCCGCGAACTTCATGTCGCGGAACACGGCCGGCAGG > 1:592839/1‑235 AGTTCGCGGACTACCAGAAAATCCGTTTCCTGCAGGAAAAGGCCGAGTGGGCCAAGGACAAGACCCCGTTCAAGCTGTCGTTCTATCATCAGGGCATGCACTTCGACACCCCGGTGAAAATCAACGAGGTCACCGCCACCAAGGTCGAGGAAATCAAGTACGACCCGGACCGCTTCGAGTTCGGTGACGTGCCGCACGACCCGGAAACCACGAAAAACCTCGGTTATGCCGGTTTCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5728489‑5728252‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtttccgGGTCGTGCGGCACGTCACCGAACTCGAAGCGGTCCGGGTCGTACTTGATTTCCTCGACCTTGGTGGCGGTGACCTCGTTGATTTTCACCGGGGTGTCGAAGTGCATGCCCTGATGATAGAACGACAGCTTGAACGGGGTCTTGTCCTTGGCCCACTCGGCCTTTTCCTGCAGGAAACGGATTTTCTGGTAGTCCGCGAACTTCATGTCGCGGAACACGGCCGGCAGG > AE015451/5728289‑5728515 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |