New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5825709 =	55 (0.950)	3 (0.050)	3/326	NT	5.0%	coding (586/813 nt)	thiG	thiazole synthase
	?	AE015451	5825778 =	61 (1.110)					coding (517/813 nt)	thiG	thiazole synthase

CAACCCCTACAACCTGCAGATCATCCTGGAAGAATCCAAGGTACCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5825758‑5825709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtgcCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTTCGATCACGTTGGGGAACAGGGTTTTCTGGTCGGCCAGCACTTCCAGCTTCACCAGCGTCCGGGACTCGTGCGATT  >  AE015451/5825778‑5825987                                                                                                                                                                                                                                                                      CAACCCCTACAACCTGCAGATCATCCTGGAAGAATCCAAGGTACCGGTGCCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCg                                                                                          >  2:898168/1‑171            ACCTGCAGATCATCCTGGAAGAATCCAAGGTACCGGTGCCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACG                                                                                                                                                             >  1:954565/1‑94            ACCTGCAGATCATCCTGGAAGAATCCAAGGTACCGGTGCCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACG                                                                                                                                                             <  2:954562/94‑1                                           ACCGGTGCCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGCCGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTTCGATCACGTTGGGGAACAGGGTTTTCTGGTCGG                                            >  1:179823/1‑176                                              GGTGCCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTTCGATCACGTTGGGGAACAGGGTTTTCTGGTCGGCCAGCACTTCCAGCTTCACCAGCGTCCGGGACTCGTGCGAT   >  2:899153/1‑214                                                TGCCAATCAGTCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTTCGATCACGTTGGGGAACAGGGTTTTCTGGTCGGCCAGCACTTCCAGCTTCACCAGCGTCCGGGACTCGTGCGATT  <  2:840004/213‑1                                                  CCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTT                                                                             >  1:601557/1‑136                                                  CCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTT                                                                             <  2:601554/136‑1                                                                                                                                                                                                                                                                      CAACCCCTACAACCTGCAGATCATCCTGGAAGAATCCAAGGTACCGGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/5825758‑5825709 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggtgcCAATCAGGCCAGCCAGCGGCATGACCGCGATGCAGCCGACTTCGGCCAGCTGACGGGCGATGATCGGATCGTCGCTGGTGTAGACCATGACGTCGAAGCCTTCCTTGACCAGCACTTCGGCTGCCTTGAGGGTTTCGATCACGTTGGGGAACAGGGTTTTCTGGTCGGCCAGCACTTCCAGCTTCACCAGCGTCCGGGACTCGTGCGATT  >  AE015451/5825778‑5825987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.