New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5927073 | 44 (0.760) | 3 (0.050) | 3/326 | NT | 6.5% | coding (822/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein |
? | AE015451 | = 5927083 | 44 (0.800) | coding (812/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein |
CCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5926838‑5927073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcaggCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGGGCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGC < AE015451/5927083‑5926858 CCGTCGGTGCCTGGCGCCGGGCGAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAG > 1:377994/1‑235 GTCGGGGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAGG < 2:540493/234‑1 CCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCG < 1:371588/214‑1 CAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACCGCGCCTTGAGGCCG > 2:54515/1‑151 GTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCA < 2:618460/149‑1 GCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGC > 1:830082/1‑136 GCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGC < 2:830079/136‑1 CGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCG < 1:790001/131‑1 CGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCG > 2:789998/1‑131 ACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGGTCTGGCAACGCGGCCGGCAT > 1:480060/1‑173 AGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGGGGTCGCCTGCGCTTTCGTCATCCCGCTGCT > 1:128094/1‑123 TGAGGCCGCGCAGGCGCTGTATCACCTGCGCGGCCTCGAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGGGCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCG > 1:438778/1‑223 CGCAGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGGGCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGC < 2:566304/232‑1 CGCAGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCG < 1:349020/153‑1 CGCAGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACG < 2:74050/121‑1 AGGCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACA > 1:139531/1‑165 CCGTCGGTGCCTGGCGCCGGGCAAAGGCCAGCAGCAGCGCCACGCATACCGTGACCAGCGCCGCCATGCTGCCCAGGTACAGGGTGTGCAGCACCAGGCCGATATAACGCTCATCCAGGTCATGCCGGCCGCGTTGCCAGAACCACGCCAGCAACTGCAGCAGCGGGATGACGAAAGCGCAGGCGAACACCAGCAGGCACCAGCCACTGGCCAACAGCGCCTTGAGGCCGCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5926838‑5927073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcgcaggCGCTGTATCACCTGCGCGGCCTCAAGGCGCTGTTGGCCAGTGGCTGGTGCCTGCTGGTGTTCGCCTGCGCTTTCGTCATCCCGCTGCTGCAGTTGCTGGCGTGGTTCTGGCAACGCGGCCGGCATGACCTGGATGAGCGTTATATCGGCCTGGTGCTGCACACCCTGTACCTGGGCAGCATGGCGGCGCTGGTCACGGTATGCGTGGCGCTGCTGCTGGCCTTTGC < AE015451/5927083‑5926858 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |