| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 6070767 = | 76 (1.320) | 4 (0.070) | 4/322 | NT | 5.2% | intergenic (‑123/+40) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein |
| ? | AE015451 | 6070789 = | 73 (1.350) | intergenic (‑145/+18) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein | |||||
GAGCGTGATCTGGGTGCTGCGCTCGCTGGAGCGTATTGGCGACCATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6071002‑6070767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggcgtCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGCTCCAGCGAGCGCAGCACCCAGATCACGCTCAGCACCCGCGAGATAGAG > AE015451/6070789‑6071020 GAGCGTGATCTGGGTGCTGCGCTCGCTGGAGCGTATTGGCGACCATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCACCACATGGGCCTCAAGCGCATGACGGCAGAAGAGCAGAGCACTGCTGTCGCCAACGGCGAAAAGGCTACTGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCAGGGCGT > 1:598518/1‑236 TGGGTGCCGCGCGCGCTGGAGCGTATGGGCGACCATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGC < 2:312726/224‑1 TATTGGCGACCATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTCGATG < 1:510725/208‑1 TATTGGCGACAATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCC < 1:527269/197‑1 GCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCA < 1:1020258/219‑1 GCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCA > 2:1020255/1‑219 CACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCTCCCGGAACATTAGCCTTTTCG < 1:568835/194‑1 CACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACC < 2:571065/175‑1 CGGGCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCCTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCAGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGCTCCAGC > 2:1029641/1‑197 GCGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGCTCCAGCGAGCGCAGCACCCAGATCACGCTCAGCACCCGCGAGATAGAG < 1:887530/236‑1 CGTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTc > 2:118573/1‑143 GTCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGC > 2:538192/1‑186 TCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGCTCCAGCGAGCGCAGCACCCAGATCACGCTCA > 2:988475/1‑216 GAGCGTGATCTGGGTGCTGCGCTCGCTGGAGCGTATTGGCGACCATGCGCGCAACATCTCCGAACTGGTGATCTACCTGGTGCGCGGCACCGACGTGCGCCACATGGGCCTCAAGCGCATGACGGCAGAAGTGCAGGGCACTGCTGTCGCCAACGGCGAAAAGGCTAATGTTCCGGGTGAATCTGACGATAAGTAAGGTTGCTCCCGAGCATCGACGCCCGGCCTTGGCCGGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/6071002‑6070767‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgggcgtCGATGCTCGGGAGCAACCTTACTTATCGTCAGATTCACCCGGAACATTAGCCTTTTCGCCGTTGGCGACAGCAGTGCCCTGCACTTCTGCCGTCATGCGCTTGAGGCCCATGTGGCGCACGTCGGTGCCGCGCACCAGGTAGATCACCAGTTCGGAGATGTTGCGCGCATGGTCGCCAATACGCTCCAGCGAGCGCAGCACCCAGATCACGCTCAGCACCCGCGAGATAGAG > AE015451/6070789‑6071020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |