New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	6071413 =	83 (1.440)	6 (0.110)	4/322	NT	7.5%	coding (165/771 nt)	phoU	phosphate transport‑associated protein
	?	AE015451	6071506 =	70 (1.290)					coding (72/771 nt)	phoU	phosphate transport‑associated protein

CTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6071656‑6071413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggtgGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAG  >  AE015451/6071506‑6071738                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCC                                                                                                                                                                                                                                                    >  1:560391/1‑235                     TTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGC                                                                                                                                                                                                                                      <  1:458424/229‑1                                                            CGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTG                                                                                                                                                                                                                                           >  2:801359/1‑185                                                                          AAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGA                                                                                                                                                                                                                          <  1:757812/188‑1                                                                                        CAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGA                                                                                                                                                                                                                          <  1:24813/174‑1                                                                                                                   CCAGCAGTTGAACGCCGAGCTGGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCG                                                                                                                                                                                                                  <  2:125327/155‑1                                                                                                                                   GAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGA                                                                                                                                                                                                                          <  2:886142/131‑1                                                                                                                                      CTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGG                                                                                                                                                                                                      <  1:31974/148‑1                                                                                                                                                                                         caaGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTT                                                                                                                                                                                                                <  2:86509/84‑1                                                                                                                                                                                                                                           CCAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTG          >  1:409647/1‑235                                                                                                                                                                                                                                            CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT        <  1:440605/236‑1                                                                                                                                                                                                                                            CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT        <  1:670041/236‑1                                                                                                                                                                                                                                            CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT        <  1:670805/236‑1                                                                                                                                                                                                                                            CAGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTT           <  1:428755/233‑1                                                                                                                                                                                                                                             AGCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCCGCTTCTTCGCCGGGTTGGT        <  1:1017646/235‑1                                                                                                                                                                                                                                              GCAGGTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGT        <  1:535861/234‑1                                                                                                                                                                                                                                                  GTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAG  >  1:569777/1‑236                                                                                                                                                                                                                                                  GTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTG          >  1:301302/1‑228                                                                                                                                                                                                                                                  GTGGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGCTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGA      <  2:826842/232‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTTGGTGTCTGGCACCGGGGTTGCCGGTGTTCGCGGGTGAACCCGCTCCTACAGGGCCGCGCTACCAAAGGACAAAACGATGATCAACAAAGAAAGCCTTACCCATCACATTTCCCAGCAGTTCAACGCCGAGCTCGAAGAGGTGCGCAGCCACCTGCTGGCCATGGGCGGGCTGGTGGAAAAGCAGGTCAACGACGCGGTTACCGCGCTGATCGAAGCCGACTCTGGTCTGGCCCAGCAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/6071656‑6071413 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaggtgGCTGCGCACCTCTTCGAGCTCGGCGTTGAACTGCTGGGAAATGTGATGGGTAAGGCTTTCTTTGTTGATCATCGTTTTGTCCTTTGGTAGCGCGGCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCAACCCCGGTGCCAGACACCAAGGTGCCTGTTTCGCGAGCGGCGCTTAGCCGTAGCGACCGGTGATGTAGTCTTCGGTCTGCTTCTTCGCCGGGTTGGTGAACAG  >  AE015451/6071506‑6071738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.