New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 6111976	63 (1.090)	3 (0.060)	3/322	NT	4.7%	coding (353/381 nt)	PP_5362	conserved exported protein of unknown function
	?	AE015451	= 6111977	62 (1.140)					coding (354/381 nt)	PP_5362	conserved exported protein of unknown function
Rejected: Frequency below/above cutoff threshold.

CCAGGACGGCAAAGGCAGTTACTACAGTGTGCGTACTGAAGGCAGCACCTTCTACCTTCGCGGCTACGACTTCAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGAGGCCTGGGTGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6111740‑6111976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagctgcaATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGCCGACGGCTGCTGAAGTCGTAGCCGCGAAGGTAGAAGGTGCTGCCTTCAGTA  <  AE015451/6111977‑6111773                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCAGGACGGCAAAGGCAGTTACTACAGTGTGCGTACTGAAGGCAGCACCTTCTACCTTCGCGGCTACGACTTCAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGATGCCTGGGTGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCGCGAATCCAGTTCCAGCGGGGAGCGCTTCAAGCT                                                                                                                                                                                                                  >  2:658691/1‑234                            TGTGCGTACTGAAGGCAGCACCTTCTACCTTCGCGGCTACGACTTCAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGAGGCCTGGGGGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTT                                                                                                                                                                                                                        >  1:128225/1‑201                                           CAGCACCTTCTACCTTCGCGGCTACGACTTCAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGAGGCCTGGGTGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCTCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCT                                                                                                                                                                                                                  >  2:578880/1‑192                                                                         CAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGAGGCCTGGGTGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCA                                                                                                                                                                                                               <  2:91467/165‑1                                                                                                                                                                                  CGTAGGCTGGACCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCAATGCAGCTTGACGCGCTCCCGGCTGGAACTGGATACGCGGCTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTC                                                                                                                        >  2:1069026/1‑147                                                                                                                                                                                             CCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCAATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGG                                                                                                                                               >  1:678139/1‑113                                                                                                                                                                                                         GCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCAATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGCC                                                    >  1:574454/1‑192                                                                                                                                                                                                                                       cGCTGCAATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCAT                                                                               <  2:18804/134‑1                                                                                                                                                                                                                                           GCAATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGCCGACGGCTGCTGAAGTCGTAGCCGCGAAGGTAGAAGGTGCTGCCTTC      <  2:78099/204‑1                                                                                                                                                                                                                                             AATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCCTCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGC                                                     <  2:458630/155‑1                                                                                                                                                                                                                                             AATGCAGCTTGAAGCGCTCCCCGCGGGAACTGGATACGCGGGTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGCCGACGGCTGCTGAAGTCGTAGCCGCGAAGGTAGAAGGTGCTGCCTTCAGTA  <  2:276112/206‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCAGGACGGCAAAGGCAGTTACTACAGTGTGCGTACTGAAGGCAGCACCTTCTACCTTCGCGGCTACGACTTCAGCAGCCGTCGGCTGTGGGCACAAACCAACAGCCGCTATGGCACATTGACTTTTTTTACCGGCCTGGCCAGCGATGGTGAGGCCTGGGTGGGCTACAGCCGCCGCGTAGGCTGGACCACCTTGAACCGCGTATCCAGTTCCAGCGGGGAGCGCTTCAAGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/6111740‑6111976 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaagctgcaATGCAGCTTGAAGCGCTCCCCGCTGGAACTGGATACGCGGTTCAAGGTGGTCCAGCCTACGCGGCGGCTGTAGCCCACCCAGGCCTCACCATCGCTGGCCAGGCCGGTAAAAAAAGTCAATGTGCCATAGCGGCTGTTGGTTTGTGCCCACAGCCGACGGCTGCTGAAGTCGTAGCCGCGAAGGTAGAAGGTGCTGCCTTCAGTA  <  AE015451/6111977‑6111773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.