New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3951097	35 (0.610)	10 (0.170)	6/340	NT	23.0%	intergenic (‑61/+134)	PP_3486/PP_3487	putative cytochrome c/conserved exported protein of unknown function
	?	AE015451	= 3951157	32 (0.560)					intergenic (‑121/+74)	PP_3486/PP_3487	putative cytochrome c/conserved exported protein of unknown function

GGCAGCACGCTGGCGGGGACTGTGATATCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCTTATCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGT  >  AE015451/3950885‑3951318                                                                                                                                                                                                                     |                                                                                                                                                                                                                              ggCAGCACGCTGGCGGGGACTGTGATATCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTg                                                                                                                                                                                                        >  1:751119/1‑236 (MQ=255)         gCTGGCGGGGACTGTGATATCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCt                                                                                                                                                                                                                            >  1:766322/1‑208 (MQ=255)            ggCGGGGACTGTGATATCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTCGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGTCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCa                                                                                                                                                                                                <  2:539997/233‑1 (MQ=255)                           atCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCgcagca                                                                                                                                                                                                                    <  2:861190/198‑1 (MQ=255)                           atCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGACAGAGGGGa                                                                                                                                                                               >  1:1029660/1‑235 (MQ=255)                            tCGCGGGCGCCGACCCGGGCTTGCAATGGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGcccc                                                                                                                                                                                                               <  2:84420/202‑1 (MQ=255)                               cTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAgcgcg                                                                                                                                                                          >  1:289551/1‑235 (MQ=255)                                tGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGc                                                                                                                                                                                                            >  1:341497/1‑201 (MQ=255)                                                              cGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGGCGCGAAAGGGCTGCGCAGCAGCCCCGGCCGTg                                                                                                                                                                                                        >  2:190151/1‑175 (MQ=255)                                                                           gCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCt                                                                                                                                                                                                  >  2:303710/1‑168 (MQ=255)                                                                            cccTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAt                                                                                                                              >  1:976134/1‑235 (MQ=255)                                                                              cTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGcc                                                                                                                                                                                                     >  1:552917/1‑161 (MQ=255)                                                                              cTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGCCAGTGGCAGCCCAAgc                                                                                                                                                                                             >  1:336778/1‑170 (MQ=255)                                                                                cgcgGTACAGGCGTTTGCCTGCTTGTTCGTGGCCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctt                                                                                                                                                               >  1:236714‑M2/1‑194 (MQ=255)                                                                                               ggcCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacaaaagc                                                                                                                                  >  1:782676‑M2/2‑179 (MQ=255)                                                                                                     cTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAggc                                                                                                      <  1:190153/234‑1 (MQ=255)                                                                                                       tGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaagg                                                                                                                                                  >  2:751116‑M2/1‑171 (MQ=255)                                                                                                             tGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAggcgg                                                                                                    <  1:149278/228‑1 (MQ=255)                                                                                                               gtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacaaa                                                                                                                                     >  1:260745‑M2/1‑163 (MQ=255)                                                                                                               gtcggtcAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacaaa                                                                                                                                     >  2:624999‑M2/1‑163 (MQ=255)                                                                                                                     cAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGGGGc                                                                                                                                                                                                      >  1:819937/1‑122 (MQ=255)                                                                                                                      aGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAgcgccg                                                                                                                                                                                         >  2:149276/1‑132 (MQ=255)                                                                                                                                 cagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCt                                                                                                                                                                                                  >  2:801113/1‑114 (MQ=255)                                                                                                                                 cagggcTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAgag                                                                         >  1:166653/1‑233 (MQ=255)                                                                                                                                       tGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCacc                                                                                     >  1:158294/1‑217 (MQ=255)                                                                                                                                         gggTGGAAGTGGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTcccc                                                                                                          <  2:55176/193‑1 (MQ=255)                                                                                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccac                                                                                                                                        <  1:279252‑M2/162‑28 (MQ=255)                                                                                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCaccgacccg                                                                               >  1:1016095/1‑217 (MQ=255)                                                                                                                                           gTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCg                                                                         <  2:976131/225‑1 (MQ=255)                                                                                                                                            tCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctt                                                                                                                                                               <  2:502480‑M1/138‑65 (MQ=255)                                                                                                                                            tCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctt                                                                                                                                                               >  1:502483‑M1/1‑74 (MQ=255)                                                                                                                                                       atgccaAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgccccca                                                                                                                                         <  1:425241‑M2/149‑27 (MQ=255)                                                                                                                                                                aCGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCGCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGAGGCcaca                                                                                                                        >  2:282861/1‑157 (MQ=255)                                                                                                                                                                 ggCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCGGCGCAGCGGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAg                                                                                                        <  1:1029779/171‑1 (MQ=255)                                                                                                                                                                                tCGCAGGCCCTGTGGGGGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCa                                                                <  1:692762/197‑1 (MQ=255)                                                                                                                                                                                     gcttttgtgggagcGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccctggacctgaccgaccacgaacaagcaggcc                                            >  1:782676‑M1/6‑33 (MQ=255)                                                                                                                                                                                        tttgtgggAGCGGCCTTGCGTCGCGAAAGGagggcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgc                                                                                                                                                                        >  1:357452‑M1/3‑30 (MQ=255)                                                                                                                                                                                        tttgtgggAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccctggacctgaccgac                                                            >  1:260745‑M1/3‑30 (MQ=255)                                                                                                                                                                                        tttgtgggAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccctggacctgaccgac                                                            >  2:624999‑M1/3‑30 (MQ=255)                                                                                                                                                                                        ccTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATgcg                                                   >  1:87005/1‑202 (MQ=255)                                                                                                                                                                                        ccTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGc                                             <  1:830255/208‑1 (MQ=255)                                                                                                                                                                                         cTGTGGGAGCGGCCTTGCGTCGCGAAAGG                                                                                                                                                                                                                               >  2:756567‑M1/1‑29 (MQ=255)                                                                                                                                                                                          tgtgGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgcggcgcagccctttcgcga                                                                                                                                                         >  2:399109‑M1/1‑28 (MQ=255)                                                                                                                                                                                          gggggggGCGGCCTTGCGTCGCGAAAGGGCGGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCa                                                                                                <  2:308728/152‑1 (MQ=255)                                                                                                                                                                                           gtgGGAGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgac                                                                                        <  1:279252‑M1/162‑136 (MQ=255)                                                                                                                                                                                           gtgGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGGCACAGAGGCCAATTCCCCAgg                                                                                                       >  2:975423/1‑147 (MQ=255)                                                                                                                                                                                            tgGGGGCGGCCTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcat                                                                                                    <  1:425241‑M1/149‑124 (MQ=255)                                                                                                                                                                                              ggAGCGGCCTTGCGTCGCGAAAGGGCTGAGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGTGa                                                                                                                                                                               >  2:246943/1‑72 (MQ=255)                                                                                                                                                                                                     ccTTGCGTCGCGAAAGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccctggacctgaccgaccacgaaca                                                    >  2:751116‑M1/1‑17 (MQ=255)                                                                                                                                                                                                     ccTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTg                                                         >  2:830252/1‑183 (MQ=255)                                                                                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCaa                                                                                                                >  2:175744/1‑126 (MQ=255)                                                                                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGt                                                                  <  1:5981/172‑1 (MQ=255)                                                                                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCCACAGCTGCagg                                                     >  1:164164/1‑183 (MQ=255)                                                                                                                                                                                                       ttGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGt  >  1:1026326/1‑236 (MQ=255)                                                                                                                                                                                                          cGTCGCGAAAGGGCTGCGCCGCAGCCCCGGCAGTGGCAGCTAAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctt                                                                                                                                                               >  2:122567‑M2/1‑72 (MQ=255)                                                                                                                                                                                                            tCGCGAAAGGGCTGCGCCGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccaca                                                                                                                                       >  2:399109‑M2/1‑70 (MQ=255)                                                                                                                                                                                                                  aaGGagcgcgcagcgctcccctctttctgcgctttagctgccactgccggggctgcggcgcagccctttcgcgacg                                                                                                                                                       >  2:122567‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                  aaGGagcgcgcagcgctcccctctttctgcgcttgagctgccactgccggggctgctgcgcagccctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcgacctcagccctggccctggacctgaccggccacgaacaagcaggcaaacgcctgtaccgcg                             >  1:236714‑M1/1‑4 (MQ=255)                                                                                                                                                                                                                  aaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcga                                                                                         <  2:502480‑M2/138‑75 (MQ=255)                                                                                                                                                                                                                  aaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTcctttcgcgacgcaaggccgctcccacagggcttgcgatatggcttacctgcgtgcttggcatggcaacttcga                                                                                         >  1:502483‑M2/1‑64 (MQ=255)                                                                                                                                                                                                                  aaGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCCTTTCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCACCAGGCGGCCCATGATACTCACCGACCgg                                                                               >  1:251089/1‑148 (MQ=255)                                                                                                                                                                                                                     |                                                                                                                                                                                                                              GGCAGCACGCTGGCGGGGACTGTGATATCGCTGGCGCCGACCCGGGCTTGCAATTGAGCGTCGCTACTGGAGACGCCCTCGCGGTAAAGGCGTTTGCCTGCTTGTTCGTGGTCGGTCAGGTCCAGGGCCAGGGCTGAGGTCGAAGTTGCCATGCCAAGCACGCAGGTAAGCCATATCGCAAGCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCTGCGCAGCAGCCCCGGCAGTGGCAGCTCAAGCGCAGAAAGAGGGGAGCGCTGCGCGCTCTTATCGCGACGCAAGGCCGCTCCCACAAAAGCGGATGCCACAGAGGCCAATTCCCCAGGCGGCCCATGATACTCACCGACCGGCCAGCGGCTGGGTCAACAGCTGCATGCGCTGGGCAATCGCCGCTGGCGGTGCATCCGGGCGAATCTTGCTCCAGCGT  >  AE015451/3950885‑3951318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.